RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 GOLGA8AA7E2F4 631 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 MEIS2O14770 477 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 RGS20O76081 388 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 FGBP02675 491 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 ITGA7Q13683 1181 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 RAB30Q15771 203 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 LY6KQ17RY6 165 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 Q6ZUG5 572 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 VSIG10LQ86VR7 867 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 HERVK_113Q902F9 699 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 UHRF1Q96T88 793 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-223ENST00000584760 SLC28A3Q9HAS3 691 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 POLR3EQ9NVU0 708 aa15.34■□□□□ 0.05
SREBF1-223ENST00000584760 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
SREBF1-223ENST00000584760 CD4P01730 458 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 MYCLP12524 364 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-223ENST00000584760 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
SREBF1-223ENST00000584760 CDC27P30260 824 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 CCND2P30279 289 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 PSMC6P62333 389 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 FGD1P98174 961 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 APOBRQ0VD83 1088 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 USP17L6PQ6QN14 398 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 OTOP2Q7RTS6 562 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.045e-7■■■■□ 23.9
SREBF1-223ENST00000584760 BRF1Q92994 677 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 EMID1Q96A84 441 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-223ENST00000584760 MTIF3Q9H2K0 278 aaKnown RBP15.33■□□□□ 0.04
SREBF1-223ENST00000584760 YBX2Q9Y2T7 364 aaKnown RBP15.33■□□□□ 0.04
SREBF1-223ENST00000584760 MRVI1Q9Y6F6 885 aa15.33■□□□□ 0.04
SREBF1-223ENST00000584760 GH1P01241 217 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 MYL3P08590 195 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 PSMA5P28066 241 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
SREBF1-223ENST00000584760 MRPS9P82933 396 aaKnown RBP15.32■□□□□ 0.04
SREBF1-223ENST00000584760 BRDTQ58F21 947 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-223ENST00000584760 WWC2Q6AWC2 1192 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 HEATR3Q7Z4Q2 680 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 MICALL1Q8N3F8 863 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 SMARCC2Q8TAQ2 1214 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 MTG1Q9BT17 334 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-223ENST00000584760 SEZ6LQ9BYH1 1024 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 HIPK3Q9H422 1215 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 ZSWIM6Q9HCJ5 1215 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 UMODL1Q5DID0 1318 aa15.32■□□□□ 0.04
SREBF1-223ENST00000584760 KPNA6O60684 536 aa15.31■□□□□ 0.04
SREBF1-223ENST00000584760 MMP3P08254 477 aa15.31■□□□□ 0.04
SREBF1-223ENST00000584760 RABGGTBP53611 331 aa15.31■□□□□ 0.04
SREBF1-223ENST00000584760 CCL23P55773 120 aa15.31■□□□□ 0.04
SREBF1-223ENST00000584760 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
SREBF1-223ENST00000584760 CUL5Q93034 780 aa15.31■□□□□ 0.04
SREBF1-223ENST00000584760 ZFP91Q96JP5 570 aaPredicted RBP15.31■□□□□ 0.04
SREBF1-223ENST00000584760 INPP4AQ96PE3 977 aaPredicted RBP15.31■□□□□ 0.04
SREBF1-223ENST00000584760 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
SREBF1-223ENST00000584760 STXBP3O00186 592 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 B4GALT4O60513 344 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 STAM2O75886 525 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 UBA1P22314 1058 aaKnown RBP15.3■□□□□ 0.04
SREBF1-223ENST00000584760 ADD1P35611 737 aaKnown RBP15.3■□□□□ 0.04
SREBF1-223ENST00000584760 EVCP57679 992 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 TOB2Q14106 344 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-223ENST00000584760 UBE2SQ16763 222 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 PCNX4Q63HM2 1172 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 PPP1R18Q6NYC8 613 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 KCNV1Q6PIU1 500 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 NECAB3Q96P71 396 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-223ENST00000584760 TM6SF1Q9BZW5 370 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 TRPV6Q9H1D0 765 aa15.3■□□□□ 0.04
SREBF1-223ENST00000584760 ALDH8A1Q9H2A2 487 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-223ENST00000584760 TSPYL2Q9H2G4 693 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-223ENST00000584760 NAP1L2Q9ULW6 460 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-223ENST00000584760 CCDC196A0A1B0GTZ2 297 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 TGFB3P10600 412 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 HOXD8P13378 290 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-223ENST00000584760 MYOGP15173 224 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 ICAM3P32942 547 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 SP2Q02086 613 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 SEMA3FQ13275 785 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 MYSM1Q5VVJ2 828 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-223ENST00000584760 PPTC7Q8NI37 304 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 UPF3BQ9BZI7 483 aaKnown RBP15.29■□□□□ 0.04
SREBF1-223ENST00000584760 SLC4A7Q9Y6M7 1214 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-223ENST00000584760 SCN5AQ14524 2016 aa15.29■□□□□ 0.04
SREBF1-223ENST00000584760 TRIP12Q14669 1992 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-223ENST00000584760 ZBBXA8MT70 800 aa15.28■□□□□ 0.04
SREBF1-223ENST00000584760 GGPS1O95749 300 aa15.28■□□□□ 0.04
SREBF1-223ENST00000584760 PLA2G5P39877 138 aa15.28■□□□□ 0.04
SREBF1-223ENST00000584760 NAPAP54920 295 aa15.28■□□□□ 0.04
SREBF1-223ENST00000584760 TFF2Q03403 129 aa15.28■□□□□ 0.04
SREBF1-223ENST00000584760 NBPF20Q3BBV1 942 aa15.28■□□□□ 0.04
SREBF1-223ENST00000584760 GNPTABQ3T906 1256 aa15.28■□□□□ 0.04
SREBF1-223ENST00000584760 CELF3Q5SZQ8 465 aaKnown RBP15.28■□□□□ 0.04
SREBF1-223ENST00000584760 PPP2R2DQ66LE6 453 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms