RNA–Protein interactions for RNA: ENST00000583458.5

RBFOX3-211, Transcript of RNA binding fox-1 homolog 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RBFOX3, Length 2,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-211ENST00000583458 PROCA1Q8NCQ7 364 aaPredicted RBP17.15■□□□□ 0.34
RBFOX3-211ENST00000583458 CACNA1SQ13698 1873 aa17.14■□□□□ 0.34
RBFOX3-211ENST00000583458 COL4A1P02462 1669 aa17.14■□□□□ 0.34
RBFOX3-211ENST00000583458 RAD51CO43502 376 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 ORC4O43929 436 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 TMED8Q6PL24 325 aaPredicted RBP17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 MREGQ8N565 214 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 TECP42680 631 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 MAN2A1Q16706 1144 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 KLHL7Q8IXQ5 586 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 GLIS3Q8NEA6 775 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 MMTAG2Q9BU76 263 aaKnown RBP17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 KLC4Q9NSK0 619 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 BACH1O14867 736 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 CYTH3O43739 400 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 TLR2O60603 784 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 FAM107AO95990 144 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 KLRC1P26715 233 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 KIF5BP33176 963 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 LETM2Q2VYF4 491 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
RBFOX3-211ENST00000583458 EHHADHQ08426 723 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 KCNMA1Q12791 1236 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 C6orf89Q6UWU4 347 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 ZNF804BA4D1E1 1349 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 TAF1P21675 1872 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 RASSF9O75901 435 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 PCP11498 1178 aaKnown RBP17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 CYFIP2Q96F07 1278 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 SLC40A1Q9NP59 571 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 SH3GLB2Q9NR46 395 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
RBFOX3-211ENST00000583458 CCNT1O60563 726 aaKnown RBP17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 OR52Z1P0C646 297 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 RFC4P35249 363 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 CDC37Q16543 378 aaPredicted RBP17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 RNF10Q8N5U6 811 aaKnown RBP17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 PNMA1Q8ND90 353 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 IQCDQ96DY2 449 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 PACSIN1Q9BY11 444 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 TMBIM4Q9HC24 238 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 MYMKA6NI61 221 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 HMGB1P1B2RPK0 211 aaPredicted RBP17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 CCDC172P0C7W6 258 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 PRPHP41219 470 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 SMTNP53814 917 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 LRRC41Q15345 812 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 ENOX2Q16206 610 aaKnown RBP17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 QPCTQ16769 361 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 CCDC84Q86UT8 332 aaPredicted RBP17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 TEX2Q8IWB9 1127 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 TANGO6Q9C0B7 1094 aa17.12■□□□□ 0.33
RBFOX3-211ENST00000583458 STXBP3O00186 592 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 CHUKO15111 745 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 TMOD1P28289 359 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 ERVK-9P63128 1117 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 PTPROQ16827 1216 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 DDX42Q86XP3 938 aaKnown RBP eCLIP17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 MAGEF1Q9HAY2 307 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 AFF2P51816 1311 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 PSEN1P49768 467 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 HLTFQ14527 1009 aaKnown RBP eCLIP17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 TSKSQ9UJT2 592 aa17.11■□□□□ 0.33
RBFOX3-211ENST00000583458 SSU72P8A0A1W2PR75 194 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 ECHS1P30084 290 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 HSD17B3P37058 310 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 HSPA9P38646 679 aaKnown RBP17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 RPS8P62241 208 aaKnown RBP17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 TFAP4Q01664 338 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 ARID5AQ03989 594 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 UAP1Q16222 522 aaPredicted RBP17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 MEI1Q5TIA1 1274 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 LRRC55Q6ZSA7 311 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 OSBPL7Q9BZF2 842 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 GOLPH3Q9H4A6 298 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 KANSL2Q9H9L4 492 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 DDX20Q9UHI6 824 aaKnown RBP17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 SRCAPQ6ZRS2 3230 aa17.1■□□□□ 0.33
RBFOX3-211ENST00000583458 DNM1LO00429 736 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms