RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 YIPF4Q9BSR8 244 aa6.43□□□□□ -1.38
COPS3-217ENST00000583160 EPB41L1Q9H4G0 881 aa6.43□□□□□ -1.38
COPS3-217ENST00000583160 NTMQ9P121 344 aa6.43□□□□□ -1.38
COPS3-217ENST00000583160 PPP1R1BQ9UD71 204 aaPredicted RBP6.43□□□□□ -1.38
COPS3-217ENST00000583160 TCRBV5S2A0A599 114 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
COPS3-217ENST00000583160 SYN1P17600 705 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 ATP2B1P20020 1258 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 NKX3-2P78367 333 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 CR1LQ2VPA4 569 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 EMC4Q5J8M3 183 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 RSPO2Q6UXX9 243 aaPredicted RBP6.42□□□□□ -1.38
COPS3-217ENST00000583160 NSMFQ6X4W1 530 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 LRRC47Q8N1G4 583 aaKnown RBP6.42□□□□□ -1.38
COPS3-217ENST00000583160 ARRDC4Q8NCT1 418 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.42□□□□□ -1.38
COPS3-217ENST00000583160 DCAF4Q8WV16 495 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 JAM3Q9BX67 310 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 TANGO6Q9C0B7 1094 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 NGRNQ9NPE2 291 aaKnown RBP6.42□□□□□ -1.38
COPS3-217ENST00000583160 USP40Q9NVE5 1235 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 PCDHB4Q9Y5E5 795 aa6.42□□□□□ -1.38
COPS3-217ENST00000583160 TRAV20A0A0B4J274 112 aa6.41□□□□□ -1.38
COPS3-217ENST00000583160 PABPC1P11940 636 aaKnown RBP6.41□□□□□ -1.38
COPS3-217ENST00000583160 BUD31P41223 144 aaPredicted RBP6.41□□□□□ -1.38
COPS3-217ENST00000583160 ITGA1P56199 1179 aa6.41□□□□□ -1.38
COPS3-217ENST00000583160 KCNT2Q6UVM3 1135 aa6.41□□□□□ -1.38
COPS3-217ENST00000583160 TTLL6Q8N841 843 aa6.41□□□□□ -1.38
COPS3-217ENST00000583160 OSBP2Q969R2 916 aa6.41□□□□□ -1.38
COPS3-217ENST00000583160 PPARGC1AQ9UBK2 798 aaKnown RBP6.41□□□□□ -1.38
COPS3-217ENST00000583160 PDPK1O15530 556 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 NOBOXO60393 691 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 RPL13P26373 211 aaKnown RBP6.4□□□□□ -1.38
COPS3-217ENST00000583160 THBS2P35442 1172 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 NTRK3Q16288 839 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 YOD1Q5VVQ6 348 aaPredicted RBP6.4□□□□□ -1.38
COPS3-217ENST00000583160 SPATC1Q76KD6 591 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 ZNF761Q86XN6 746 aaPredicted RBP6.4□□□□□ -1.38
COPS3-217ENST00000583160 ADAMTS17Q8TE56 1095 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 ZNF669Q96BR6 464 aaPredicted RBP6.4□□□□□ -1.38
COPS3-217ENST00000583160 TOE1Q96GM8 510 aaKnown RBP6.4□□□□□ -1.38
COPS3-217ENST00000583160 SMOC1Q9H4F8 434 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 DTLQ9NZJ0 730 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 MYOTQ9UBF9 498 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 MSRB2Q9Y3D2 182 aa6.4□□□□□ -1.38
COPS3-217ENST00000583160 BLACEA4D250 179 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 KRIT1O00522 736 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 PRICKLE3O43900 615 aaPredicted RBP6.39□□□□□ -1.39
COPS3-217ENST00000583160 MAFKO60675 156 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 GJA9P57773 515 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 IFRD2Q12894 506 aaPredicted RBP6.39□□□□□ -1.39
COPS3-217ENST00000583160 UBXN11Q5T124 520 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 ZFYVE27Q5T4F4 411 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 ERICH6BQ5W0A0 696 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 LBX2Q6XYB7 198 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 PHOSPHO1Q8TCT1 267 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 SPATA9Q9BWV2 254 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 SLC6A20Q9NP91 592 aa6.39□□□□□ -1.39
COPS3-217ENST00000583160 CCDC85CA6NKD9 419 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 LRG1P02750 347 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 CELA3BP08861 270 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 GTF2F1P35269 517 aaKnown RBP eCLIP6.38□□□□□ -1.39
COPS3-217ENST00000583160 ADAM9Q13443 819 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 RTP5Q14D33 572 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 KIZQ2M2Z5 673 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 SKOR2Q2VWA4 1001 aaPredicted RBP6.38□□□□□ -1.39
COPS3-217ENST00000583160 PRR31Q5SQ13 230 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 TEPPQ6URK8 271 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 IFNL3Q8IZI9 196 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 PIP4K2CQ8TBX8 421 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 DDX1Q92499 740 aaKnown RBP6.38□□□□□ -1.39
COPS3-217ENST00000583160 ZFYVE21Q9BQ24 234 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 CCDC113Q9H0I3 377 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 ASH2LQ9UBL3 628 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 DUSP10Q9Y6W6 482 aa6.38□□□□□ -1.39
COPS3-217ENST00000583160 SLC27A2O14975 620 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 GRK2P25098 689 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 GRK3P35626 688 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 GPR85P60893 370 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 PLP2Q04941 152 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 MTERF2Q49AM1 385 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 NBPF6Q5VWK0 638 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 STYK1Q6J9G0 422 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 CYP4F22Q6NT55 531 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 OTOP3Q7RTS5 596 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 NBPF4Q96M43 638 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 C8orf37Q96NL8 207 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 KCNJ15Q99712 375 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 LNPKQ9C0E8 428 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 PFDN2Q9UHV9 154 aa6.37□□□□□ -1.39
COPS3-217ENST00000583160 DDX3XO00571 662 aaKnown RBP eCLIP6.36□□□□□ -1.39
COPS3-217ENST00000583160 COL6A2P12110 1019 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 RGL3Q3MIN7 710 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 MCTP2Q6DN12 878 aa6.36□□□□□ -1.39
COPS3-217ENST00000583160 DPH6Q7L8W6 267 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms