RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 JMJD4Q9H9V9 463 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 MTUS1Q9ULD2 1270 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 HCN4Q9Y3Q4 1203 aa15.81■□□□□ 0.12
SS18-222ENST00000582792 B4E1Z4 1266 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 OPLAHO14841 1288 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 DHX16O60231 1041 aaKnown RBP15.8■□□□□ 0.12
SS18-222ENST00000582792 CFBP00751 764 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 PARP1P09874 1014 aaKnown RBP15.8■□□□□ 0.12
SS18-222ENST00000582792 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
SS18-222ENST00000582792 HSD17B4P51659 736 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 GHRHRQ02643 423 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 MBTPS1Q14703 1052 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 ENAHQ8N8S7 591 aaPredicted RBP15.8■□□□□ 0.12
SS18-222ENST00000582792 LNPKQ9C0E8 428 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 VAT1LQ9HCJ6 419 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 MYH7BA7E2Y1 1941 aa15.8■□□□□ 0.12
SS18-222ENST00000582792 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.79■□□□□ 0.12
SS18-222ENST00000582792 GPR37L1O60883 481 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 PPFIA4O75335 1185 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 LGR5O75473 907 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 RGS20O76081 388 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 ZNF200P98182 395 aaPredicted RBP15.79■□□□□ 0.12
SS18-222ENST00000582792 HIC1Q14526 733 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 FAM117BQ6P1L5 589 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 KCNV1Q6PIU1 500 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 AMNQ9BXJ7 453 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 UBE2ZQ9H832 354 aaPredicted RBP15.79■□□□□ 0.12
SS18-222ENST00000582792 ZSWIM5Q9P217 1185 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 INSL6Q9Y581 213 aa15.79■□□□□ 0.12
SS18-222ENST00000582792 EMSYQ7Z589 1322 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 IGHDP01880 384 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
SS18-222ENST00000582792 HSDL1Q3SXM5 330 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 CELF3Q5SZQ8 465 aaKnown RBP15.78■□□□□ 0.12
SS18-222ENST00000582792 MYSM1Q5VVJ2 828 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.78■□□□□ 0.12
SS18-222ENST00000582792 STOX1Q6ZVD7 989 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 SERINC5Q86VE9 423 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 PDCD2LQ9BRP1 358 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 CD320Q9NPF0 282 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 C11orf16Q9NQ32 467 aa15.78■□□□□ 0.12
SS18-222ENST00000582792 MAP3K20Q9NYL2 800 aaKnown RBP15.78■□□□□ 0.12
SS18-222ENST00000582792 MICAL3Q7RTP6 2002 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 PI4K2BG5E9Z4 385 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 RBAK-RBAKDNI3L0D1 243 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 AMHP03971 560 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 HTRA4P83105 476 aaPredicted RBP15.77■□□□□ 0.12
SS18-222ENST00000582792 LEXMQ3ZCV2 418 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 CWC27Q6UX04 472 aaKnown RBP15.77■□□□□ 0.12
SS18-222ENST00000582792 VSIG10LQ86VR7 867 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 STAG2Q8N3U4 1231 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 SAMD3Q8N6K7 520 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 DBF4BQ8NFT6 615 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 MTMR8Q96EF0 704 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 C17orf80Q9BSJ5 609 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 DSCC1Q9BVC3 393 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 KRT23Q9C075 422 aa15.77■□□□□ 0.12
SS18-222ENST00000582792 RSPH10B2B2RC85 870 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 SORBS3O60504 671 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 PPP1R11O60927 126 aaPredicted RBP15.76■□□□□ 0.11
SS18-222ENST00000582792 GGPS1O95749 300 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 RSPH10BP0C881 870 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 MYCLP12524 364 aaPredicted RBP15.76■□□□□ 0.11
SS18-222ENST00000582792 UBA1P22314 1058 aaKnown RBP15.76■□□□□ 0.11
SS18-222ENST00000582792 THPOP40225 353 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 SP2Q02086 613 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 PGM5Q15124 567 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 IMMTQ16891 758 aaKnown RBP15.76■□□□□ 0.11
SS18-222ENST00000582792 MYOCDQ8IZQ8 938 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.76■□□□□ 0.11
SS18-222ENST00000582792 SP7Q8TDD2 431 aaPredicted RBP15.76■□□□□ 0.11
SS18-222ENST00000582792 UBAC1Q9BSL1 405 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 C16orf70Q9BSU1 422 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 OSBPL3Q9H4L5 887 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 CNNM2Q9H8M5 875 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 DIAPH3Q9NSV4 1193 aa15.76■□□□□ 0.11
SS18-222ENST00000582792 C17orf102A2RUQ5 167 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 FAM86C2PA6NEL3 165 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 KLRF2D3W0D1 207 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 ZBTB5O15062 677 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 TGFB3P10600 412 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 KCNA5P22460 613 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 HOXC8P31273 242 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 PLEKHG4Q58EX7 1191 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 IFIT1BQ5T764 474 aaKnown RBP15.75■□□□□ 0.11
SS18-222ENST00000582792 PLEKHM2Q8IWE5 1019 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 FAM178BQ8IXR5 827 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 IL31RAQ8NI17 732 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 MRPL38Q96DV4 380 aaKnown RBP15.75■□□□□ 0.11
SS18-222ENST00000582792 PCDHA1Q9Y5I3 950 aa15.75■□□□□ 0.11
SS18-222ENST00000582792 HIP1O00291 1037 aa15.74■□□□□ 0.11
SS18-222ENST00000582792 HOXA13P31271 388 aaPredicted RBP15.74■□□□□ 0.11
SS18-222ENST00000582792 GJD3Q8N144 294 aa15.74■□□□□ 0.11
SS18-222ENST00000582792 SAMD11Q96NU1 681 aa15.74■□□□□ 0.11
SS18-222ENST00000582792 MLXIPQ9HAP2 919 aa15.74■□□□□ 0.11
SS18-222ENST00000582792 CTNNA3Q9UI47 895 aa15.74■□□□□ 0.11
SS18-222ENST00000582792 MAD2L2Q9UI95 211 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms