RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 C7orf31Q8N865 590 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 FANCBQ8NB91 859 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 MYLIPQ8WY64 445 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 SPATA33Q96N06 139 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 MSRAQ9UJ68 235 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 MEIS2O14770 477 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 PARNO95453 639 aaKnown RBP25.75■■□□□ 1.71
CASC3-207ENST00000581849 ACTN1P12814 892 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 MRPS9P82933 396 aaKnown RBP25.75■■□□□ 1.71
CASC3-207ENST00000581849 HSDL1Q3SXM5 330 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 PCNX4Q63HM2 1172 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 GDF6Q6KF10 455 aaPredicted RBP25.75■■□□□ 1.71
CASC3-207ENST00000581849 SYNE3Q6ZMZ3 975 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 TEX2Q8IWB9 1127 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 CTAGE1Q96RT6 745 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 MLXIPQ9HAP2 919 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 SLC4A7Q9Y6M7 1214 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 SCN5AQ14524 2016 aa25.75■■□□□ 1.71
CASC3-207ENST00000581849 GRXCR1A8MXD5 290 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 SPATA31C2B4DYI2 1134 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 FIBPO43427 364 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 FOSL2P15408 326 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 RXRAP19793 462 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 CHMP4BP1P59074 171 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 EXOSC10Q01780 885 aaKnown RBP25.74■■□□□ 1.71
CASC3-207ENST00000581849 SP2Q02086 613 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 NEDD9Q14511 834 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 KIAA0753Q2KHM9 967 aa25.74■■□□□ 1.71
CASC3-207ENST00000581849 DHX32Q7L7V1 743 aaKnown RBP25.74■■□□□ 1.71
CASC3-207ENST00000581849 RBM28Q9NW13 759 aaKnown RBP25.74■■□□□ 1.71
CASC3-207ENST00000581849 PBX2P40425 430 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 GRIN2CQ14957 1233 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 APOA5Q6Q788 366 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 USP17L6PQ6QN14 398 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 METTL7BQ6UX53 244 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 MICU3Q86XE3 530 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 MAFAQ8NHW3 353 aaPredicted RBP25.73■■□□□ 1.71
CASC3-207ENST00000581849 PPP1R13LQ8WUF5 828 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 LRRC2Q9BYS8 371 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 HDAC6Q9UBN7 1215 aa25.73■■□□□ 1.71
CASC3-207ENST00000581849 TRIP12Q14669 1992 aaPredicted RBP25.73■■□□□ 1.71
CASC3-207ENST00000581849 HMGB1P09429 215 aaKnown RBP25.72■■□□□ 1.71
CASC3-207ENST00000581849 ZNF286BP0CG31 522 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 RCAN1P53805 252 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 DEFB128Q7Z7B8 93 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 CCDC136Q96JN2 1154 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 SENP7Q9BQF6 1050 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 PSTPIP2Q9H939 334 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 CDH23Q9H251 3354 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 GBF1Q92538 1859 aa25.72■■□□□ 1.71
CASC3-207ENST00000581849 SELPP16109 830 aa25.71■■□□□ 1.71
CASC3-207ENST00000581849 PTK7Q13308 1070 aa25.71■■□□□ 1.71
CASC3-207ENST00000581849 CMTR1Q8N1G2 835 aaKnown RBP25.71■■□□□ 1.71
CASC3-207ENST00000581849 PHOSPHO2Q8TCD6 241 aa25.71■■□□□ 1.71
CASC3-207ENST00000581849 GPKOWQ92917 476 aaPredicted RBP eCLIP25.71■■□□□ 1.715e-7■■■■□ 23.9
CASC3-207ENST00000581849 C16orf70Q9BSU1 422 aa25.71■■□□□ 1.71
CASC3-207ENST00000581849 ALG1Q9BT22 464 aa25.71■■□□□ 1.71
CASC3-207ENST00000581849 PCDHA11Q9Y5I1 949 aa25.71■■□□□ 1.71
CASC3-207ENST00000581849 ZBBXA8MT70 800 aa25.7■■□□□ 1.7
CASC3-207ENST00000581849 BAIAP3O94812 1187 aa25.7■■□□□ 1.7
CASC3-207ENST00000581849 SEMA3FQ13275 785 aa25.7■■□□□ 1.7
CASC3-207ENST00000581849 LRRC8DQ7L1W4 858 aa25.7■■□□□ 1.7
CASC3-207ENST00000581849 NLRX1Q86UT6 975 aa25.7■■□□□ 1.7
CASC3-207ENST00000581849 RASEFQ8IZ41 740 aa25.7■■□□□ 1.7
CASC3-207ENST00000581849 GIMAP8Q8ND71 665 aaPredicted RBP25.7■■□□□ 1.7
CASC3-207ENST00000581849 DHX38Q92620 1227 aaKnown RBP25.7■■□□□ 1.7
CASC3-207ENST00000581849 SLC9A7Q96T83 725 aa25.7■■□□□ 1.7
CASC3-207ENST00000581849 NOP56O00567 594 aaKnown RBP25.69■■□□□ 1.7
CASC3-207ENST00000581849 ATP2A2P16615 1042 aaKnown RBP25.69■■□□□ 1.7
CASC3-207ENST00000581849 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.69■■□□□ 1.7
CASC3-207ENST00000581849 KCNB2Q92953 911 aa25.69■■□□□ 1.7
CASC3-207ENST00000581849 GPRASP2Q96D09 838 aa25.69■■□□□ 1.7
CASC3-207ENST00000581849 ZFP91Q96JP5 570 aaPredicted RBP25.69■■□□□ 1.7
CASC3-207ENST00000581849 CDHR1Q96JP9 859 aa25.69■■□□□ 1.7
CASC3-207ENST00000581849 USP26Q9BXU7 913 aa25.69■■□□□ 1.7
CASC3-207ENST00000581849 SLC28A3Q9HAS3 691 aa25.69■■□□□ 1.7
CASC3-207ENST00000581849 CNTNAP5Q8WYK1 1306 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 ZBTB43O43298 467 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 LGALS2P05162 132 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 ADCK5Q3MIX3 580 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 PPP1R18Q6NYC8 613 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 RAB11FIP4Q86YS3 637 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 TET1Q8NFU7 2136 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 FTOQ9C0B1 505 aaKnown RBP eCLIP25.68■■□□□ 1.7
CASC3-207ENST00000581849 RTEL1Q9NZ71 1219 aa25.68■■□□□ 1.7
CASC3-207ENST00000581849 H3BRB1 525 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 hCG_1984214I3L0E3 225 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 CXCL10P02778 98 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 CKBP12277 381 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 HOXC8P31273 242 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 RTN1Q16799 776 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 ZNF713Q8N859 430 aaPredicted RBP25.67■■□□□ 1.7
CASC3-207ENST00000581849 GPR20Q99678 358 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 TUT1Q9H6E5 874 aaKnown RBP25.67■■□□□ 1.7
CASC3-207ENST00000581849 YBX2Q9Y2T7 364 aaKnown RBP25.67■■□□□ 1.7
CASC3-207ENST00000581849 A0A0C4DFX4 3053 aa25.67■■□□□ 1.7
CASC3-207ENST00000581849 SPDYE3A6NKU9 549 aa25.66■■□□□ 1.7
CASC3-207ENST00000581849 FUT2Q10981 343 aa25.66■■□□□ 1.7
CASC3-207ENST00000581849 TRIM71Q2Q1W2 868 aaKnown RBP25.66■■□□□ 1.7
CASC3-207ENST00000581849 CYFIP1Q7L576 1253 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms