RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 KAT2BQ92831 832 aa20.23■□□□□ 0.83
SLC9A3R1-203ENST00000578958 PRDM12Q9H4Q4 367 aa20.23■□□□□ 0.83
SLC9A3R1-203ENST00000578958 HDAC6Q9UBN7 1215 aa20.23■□□□□ 0.83
SLC9A3R1-203ENST00000578958 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
SLC9A3R1-203ENST00000578958 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
SLC9A3R1-203ENST00000578958 STAM2O75886 525 aa20.22■□□□□ 0.83
SLC9A3R1-203ENST00000578958 BMP2KLQ5H9B9 411 aa20.22■□□□□ 0.83
SLC9A3R1-203ENST00000578958 PPP2R2DQ66LE6 453 aa20.22■□□□□ 0.83
SLC9A3R1-203ENST00000578958 AFAP1L1Q8TED9 768 aa20.22■□□□□ 0.83
SLC9A3R1-203ENST00000578958 GTF2IRD1Q9UHL9 959 aa20.22■□□□□ 0.83
SLC9A3R1-203ENST00000578958 RGS20O76081 388 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 F2P00734 622 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 RXRAP19793 462 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 UBA1P22314 1058 aaKnown RBP20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 LIFRP42702 1097 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 NECTIN1Q15223 517 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 HSDL1Q3SXM5 330 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 PPM1EQ8WY54 764 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 RTEL1Q9NZ71 1219 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 PCDHA11Q9Y5I1 949 aa20.21■□□□□ 0.83
SLC9A3R1-203ENST00000578958 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 PLEKHA8P1O95397 391 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 PARNO95453 639 aaKnown RBP20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SELPP16109 830 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 IGFBP4P22692 258 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 KCNJ6P48051 423 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 NEDD9Q14511 834 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 USP17L6PQ6QN14 398 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 LRRC8DQ7L1W4 858 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CCDC82Q8N4S0 544 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SLC9A7Q96T83 725 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 LRRC2Q9BYS8 371 aa20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 YBX2Q9Y2T7 364 aaKnown RBP20.2■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CDH23Q9H251 3354 aa20.19■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SP2Q02086 613 aa20.19■□□□□ 0.82
SLC9A3R1-203ENST00000578958 RAB11FIP4Q86YS3 637 aa20.19■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CMTR1Q8N1G2 835 aaKnown RBP20.19■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SRBD1Q8N5C6 995 aaKnown RBP20.19■□□□□ 0.82
SLC9A3R1-203ENST00000578958 PSTPIP2Q9H939 334 aa20.19■□□□□ 0.82
SLC9A3R1-203ENST00000578958 UNC80Q8N2C7 3258 aa20.19■□□□□ 0.82
SLC9A3R1-203ENST00000578958 HAS3O00219 553 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 FIBPO43427 364 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 BAIAP3O94812 1187 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 PTK7Q13308 1070 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 XRRA1Q6P2D8 792 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 NLRX1Q86UT6 975 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 MICU3Q86XE3 530 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 FANCBQ8NB91 859 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 PHOSPHO2Q8TCD6 241 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 GPKOWQ92917 476 aaPredicted RBP eCLIP20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 VWCEQ96DN2 955 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 NEK1Q96PY6 1258 aa20.18■□□□□ 0.82
SLC9A3R1-203ENST00000578958 MYH7BA7E2Y1 1941 aa20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SPATA31C2B4DYI2 1134 aa20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 PIK3CDO00329 1044 aa20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CKBP12277 381 aa20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 MYOGP15173 224 aa20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 MRPS9P82933 396 aaKnown RBP20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CYFIP1Q7L576 1253 aa20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 INPP4AQ96PE3 977 aaPredicted RBP20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 USP26Q9BXU7 913 aa20.17■□□□□ 0.82
SLC9A3R1-203ENST00000578958 EYSQ5T1H1 3165 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 C17orf102A2RUQ5 167 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SPDYE3A6NKU9 549 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 H3BRB1 525 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CDC45O75419 566 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 HOXD8P13378 290 aaPredicted RBP20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 ICAM3P32942 547 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 PCNX4Q63HM2 1172 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 METTL7BQ6UX53 244 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 HEATR3Q7Z4Q2 680 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SKAP1Q86WV1 359 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 COL25A1Q9BXS0 654 aaPredicted RBP20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 TUT1Q9H6E5 874 aaKnown RBP20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 FRMPD4Q14CM0 1322 aa20.16■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SCN5AQ14524 2016 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 hCG_1642624A0A1W2PR95 340 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 MEIS2O14770 477 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 FGD1P98174 961 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 ZNF200P98182 395 aaPredicted RBP20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SP4Q02446 784 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 KRT32Q14532 448 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CNKSR3Q6P9H4 555 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 TMTC3Q6ZXV5 915 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 SGMS1Q86VZ5 419 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 HERC6Q8IVU3 1022 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 GIMAP8Q8ND71 665 aaPredicted RBP20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 DHX38Q92620 1227 aaKnown RBP20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 ATP6V0A1Q93050 837 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 CDHR1Q96JP9 859 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 C16orf70Q9BSU1 422 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 ZBED2Q9BTP6 218 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 EHMT1Q9H9B1 1298 aa20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 RBM28Q9NW13 759 aaKnown RBP20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 ZNF215Q9UL58 517 aaPredicted RBP20.15■□□□□ 0.82
SLC9A3R1-203ENST00000578958 LGALS2P05162 132 aa20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 CA3P07451 260 aa20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GNAT1P11488 350 aa20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 THPOP40225 353 aa20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 RBL2Q08999 1139 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms