RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.53
CRLF3-203ENST00000578692 HDAC6Q9UBN7 1215 aa18.33■□□□□ 0.53
CRLF3-203ENST00000578692 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.53
CRLF3-203ENST00000578692 SORBS3O60504 671 aa18.32■□□□□ 0.52
CRLF3-203ENST00000578692 STAM2O75886 525 aa18.32■□□□□ 0.52
CRLF3-203ENST00000578692 MRPS9P82933 396 aaKnown RBP18.32■□□□□ 0.52
CRLF3-203ENST00000578692 KIAA0753Q2KHM9 967 aa18.32■□□□□ 0.52
CRLF3-203ENST00000578692 USP17L6PQ6QN14 398 aa18.32■□□□□ 0.52
CRLF3-203ENST00000578692 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
CRLF3-203ENST00000578692 GPKOWQ92917 476 aaPredicted RBP eCLIP18.32■□□□□ 0.52
CRLF3-203ENST00000578692 GTF2IRD1Q9UHL9 959 aa18.32■□□□□ 0.52
CRLF3-203ENST00000578692 SCN5AQ14524 2016 aa18.32■□□□□ 0.52
CRLF3-203ENST00000578692 HAS3O00219 553 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 F2P00734 622 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 ZNF286BP0CG31 522 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 ACTN1P12814 892 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 HOXD8P13378 290 aaPredicted RBP18.31■□□□□ 0.52
CRLF3-203ENST00000578692 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
CRLF3-203ENST00000578692 MFSD10Q14728 455 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 GNPTABQ3T906 1256 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 SGMS1Q86VZ5 419 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 FANCBQ8NB91 859 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 CAGE1Q8TC20 777 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 NEK1Q96PY6 1258 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 CTAGE1Q96RT6 745 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 RTEL1Q9NZ71 1219 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 FRMPD4Q14CM0 1322 aa18.31■□□□□ 0.52
CRLF3-203ENST00000578692 PIK3CDO00329 1044 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 MEIS2O14770 477 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 ICAM3P32942 547 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.3■□□□□ 0.52
CRLF3-203ENST00000578692 CCDC82Q8N4S0 544 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 AFAP1L1Q8TED9 768 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
CRLF3-203ENST00000578692 FTOQ9C0B1 505 aaKnown RBP eCLIP18.3■□□□□ 0.52
CRLF3-203ENST00000578692 NKX2-4Q9H2Z4 354 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 SLC28A3Q9HAS3 691 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 TRIP12Q14669 1992 aaPredicted RBP18.3■□□□□ 0.52
CRLF3-203ENST00000578692 SPATA31C2B4DYI2 1134 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 CDC45O75419 566 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 ATP2A2P16615 1042 aaKnown RBP18.3■□□□□ 0.52
CRLF3-203ENST00000578692 RABGGTBP53611 331 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 TSGA10IPQ3SY00 556 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 PSTPIP2Q9H939 334 aa18.3■□□□□ 0.52
CRLF3-203ENST00000578692 YBX2Q9Y2T7 364 aaKnown RBP18.3■□□□□ 0.52
CRLF3-203ENST00000578692 EXOSC10Q01780 885 aaKnown RBP18.29■□□□□ 0.52
CRLF3-203ENST00000578692 NEDD9Q14511 834 aa18.29■□□□□ 0.52
CRLF3-203ENST00000578692 PCNX4Q63HM2 1172 aa18.29■□□□□ 0.52
CRLF3-203ENST00000578692 XRRA1Q6P2D8 792 aa18.29■□□□□ 0.52
CRLF3-203ENST00000578692 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
CRLF3-203ENST00000578692 DHX38Q92620 1227 aaKnown RBP18.29■□□□□ 0.52
CRLF3-203ENST00000578692 C16orf70Q9BSU1 422 aa18.29■□□□□ 0.52
CRLF3-203ENST00000578692 PCDHA11Q9Y5I1 949 aa18.29■□□□□ 0.52
CRLF3-203ENST00000578692 GBF1Q92538 1859 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 hCG_1642624A0A1W2PR95 340 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 FIBPO43427 364 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 SELPP16109 830 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 PTK7Q13308 1070 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 TMTC3Q6ZXV5 915 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 CYFIP1Q7L576 1253 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 DHX32Q7L7V1 743 aaKnown RBP18.28■□□□□ 0.52
CRLF3-203ENST00000578692 RASEFQ8IZ41 740 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 GAS2L1Q99501 681 aaPredicted RBP18.28■□□□□ 0.52
CRLF3-203ENST00000578692 PRDM12Q9H4Q4 367 aa18.28■□□□□ 0.52
CRLF3-203ENST00000578692 H3BRB1 525 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 NOP56O00567 594 aaKnown RBP18.27■□□□□ 0.51
CRLF3-203ENST00000578692 PARNO95453 639 aaKnown RBP18.27■□□□□ 0.51
CRLF3-203ENST00000578692 CKBP12277 381 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 ZNF200P98182 395 aaPredicted RBP18.27■□□□□ 0.51
CRLF3-203ENST00000578692 RBL2Q08999 1139 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 SEMA3FQ13275 785 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 APOA5Q6Q788 366 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 LRRC8DQ7L1W4 858 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 NLRX1Q86UT6 975 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 PHOSPHO2Q8TCD6 241 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 TCEANC2Q96MN5 208 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 USP26Q9BXU7 913 aa18.27■□□□□ 0.51
CRLF3-203ENST00000578692 TUT1Q9H6E5 874 aaKnown RBP18.27■□□□□ 0.51
CRLF3-203ENST00000578692 CDH23Q9H251 3354 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 TANC1Q9C0D5 1861 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 MYOGP15173 224 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 KRT32Q14532 448 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 GPNMBQ14956 572 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 METTL7BQ6UX53 244 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 SLC9A7Q96T83 725 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 SENP7Q9BQF6 1050 aa18.26■□□□□ 0.51
CRLF3-203ENST00000578692 RBM28Q9NW13 759 aaKnown RBP18.26■□□□□ 0.51
CRLF3-203ENST00000578692 BAIAP3O94812 1187 aa18.25■□□□□ 0.51
CRLF3-203ENST00000578692 LGALS2P05162 132 aa18.25■□□□□ 0.51
CRLF3-203ENST00000578692 HIC1Q14526 733 aa18.25■□□□□ 0.51
CRLF3-203ENST00000578692 HEATR3Q7Z4Q2 680 aa18.25■□□□□ 0.51
CRLF3-203ENST00000578692 GPR20Q99678 358 aa18.25■□□□□ 0.51
CRLF3-203ENST00000578692 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
CRLF3-203ENST00000578692 SPDYE3A6NKU9 549 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 ZBTB43O43298 467 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms