RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 STK4Q13043 487 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 PAPD7Q5XG87 772 aaKnown RBP12.69□□□□□ -0.38
GGA3-205ENST00000578348 ANKRD40Q6AI12 368 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
GGA3-205ENST00000578348 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 NOC3LQ8WTT2 800 aaKnown RBP12.69□□□□□ -0.38
GGA3-205ENST00000578348 P2RX5Q93086 422 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
GGA3-205ENST00000578348 MTMR9Q96QG7 549 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 TMOD2Q9NZR1 351 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 DUSP10Q9Y6W6 482 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 ZNF185O15231 689 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 FCER1AP12319 257 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 SLC1A4P43007 532 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 BAG6P46379 1132 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 ASIC1P78348 528 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 SEPT2Q15019 361 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 CALCRLQ16602 461 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 PRMT6Q96LA8 375 aaPredicted RBP12.69□□□□□ -0.38
GGA3-205ENST00000578348 GDAP1L1Q96MZ0 367 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 NOC4LQ9BVI4 516 aaKnown RBP12.69□□□□□ -0.38
GGA3-205ENST00000578348 NUP58Q9BVL2 599 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 TRIM9Q9C026 710 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 JADE2Q9NQC1 790 aa12.69□□□□□ -0.38
GGA3-205ENST00000578348 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
GGA3-205ENST00000578348 CCNE1P24864 410 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
GGA3-205ENST00000578348 ZBED6P86452 979 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 TMEM266Q2M3C6 531 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 HPS3Q969F9 1004 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 CCDC47Q96A33 483 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 ZFP91Q96JP5 570 aaPredicted RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 NAP1L4Q99733 375 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 VPS33BQ9H267 617 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 MED4Q9NPJ6 270 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 HDAC9Q9UKV0 1011 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 KIF13BQ9NQT8 1826 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 EIF3CLB5ME19 914 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 IDEP14735 1019 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 GCFC2P16383 781 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 TNNI2P48788 182 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 CKAP4Q07065 602 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 SF3B2Q13435 895 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 UBE2SQ16763 222 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 SHROOM1Q2M3G4 852 aaPredicted RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 MAP9Q49MG5 647 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 RBM26Q5T8P6 1007 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 GMCL1Q96IK5 515 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 EIF3CQ99613 913 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 RAB34Q9BZG1 259 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 LCMT1Q9UIC8 334 aa12.68□□□□□ -0.38
GGA3-205ENST00000578348 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
GGA3-205ENST00000578348 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 RNF40O75150 1001 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 VIL1P09327 827 aaKnown RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 MCM3P25205 808 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 TECP42680 631 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 QRICH1Q2TAL8 776 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 ZNF662Q6ZS27 426 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 GSPT2Q8IYD1 628 aaKnown RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 CALML4Q96GE6 196 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 SLC37A4O43826 429 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 EDIL3O43854 480 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 GDF11O95390 407 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 TDP2O95551 362 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 PLEKP08567 350 aaPredicted RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 TXKP42681 527 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 CDC37Q16543 378 aaPredicted RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 KRT26Q7Z3Y9 468 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 LARGE2Q8N3Y3 721 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 SECISBP2LQ93073 1101 aaKnown RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 RPGRIP1Q96KN7 1286 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 CCDC42Q96M95 316 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 GMLQ99445 158 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 LRWD1Q9UFC0 647 aa12.67□□□□□ -0.38
GGA3-205ENST00000578348 FEZ2Q9UHY8 353 aaPredicted RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
GGA3-205ENST00000578348 F5H6K3 240 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 PDE2AO00408 941 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms