RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	EIF3J	O75822	258 aa	Known RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CFB	P00751	764 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GH1	P01241	217 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PARP1	P09874	1014 aa	Known RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ATP2A2	P16615	1042 aa	Known RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ITGB5	P18084	799 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RXRA	P19793	462 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ICAM3	P32942	547 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PSEN2	P49810	448 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CPT1A	P50416	773 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PTPN11	Q06124	597 aa	Predicted RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GRB10	Q13322	594 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MFSD10	Q14728	455 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	NECTIN1	Q15223	517 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PTGIS	Q16647	500 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CELF3	Q5SZQ8	465 aa	Known RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MARCH8	Q5T0T0	291 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	USP17L6P	Q6QN14	398 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SERINC5	Q86VE9	423 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RAB11FIP4	Q86YS3	637 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RASEF	Q8IZ41	740 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PPTC7	Q8NI37	304 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	NSUN6	Q8TEA1	469 aa	Known RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PPM1E	Q8WY54	764 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	IWS1	Q96ST2	819 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PCYT2	Q99447	389 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	AMN	Q9BXJ7	453 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MAF1	Q9H063	256 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RNF41	Q9H4P4	317 aa	Predicted RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	KAT14	Q9H8E8	782 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RC3H2	Q9HBD1	1191 aa	Known RBP	5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	DIAPH3	Q9NSV4	1193 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PCDHA1	Q9Y5I3	950 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SLC4A7	Q9Y6M7	1214 aa		5.19	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GSTTP1	A0A1W2PQM5	241 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SH2B2	O14492	632 aa	Predicted RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TREH	O43280	583 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TLL1	O43897	1013 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GGPS1	O95749	300 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LGALS2	P05162	132 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MYCL	P12524	364 aa	Predicted RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SELP	P16109	830 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	KCNA2	P16389	499 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	HTRA4	P83105	476 aa	Predicted RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	COL19A1	Q14993	1142 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RAB30	Q15771	203 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	STXBP2	Q15833	593 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	IMMT	Q16891	758 aa	Known RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	KIAA0753	Q2KHM9	967 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ADCK5	Q3MIX3	580 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	FAM47C	Q5HY64	1035 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TJAP1	Q5JTD0	557 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	IFIT1B	Q5T764	474 aa	Known RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RUFY4	Q6ZNE9	571 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LRRC8D	Q7L1W4	858 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	IQCA1	Q86XH1	822 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CYP2W1	Q8TAV3	490 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ADAMTS19	Q8TE59	1207 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CRYGN	Q8WXF5	182 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LINC01599	Q8WXQ3	324 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GPR20	Q99678	358 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ALG1	Q9BT22	464 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SEZ6L	Q9BYH1	1024 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LRRC2	Q9BYS8	371 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	KRT23	Q9C075	422 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RNPEP	Q9H4A4	650 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SUGCT	Q9HAC7	445 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	BRPF3	Q9ULD4	1205 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MRPL11	Q9Y3B7	192 aa	Known RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RBM8A	Q9Y5S9	174 aa	Known RBP	5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RAD50	Q92878	1312 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	C5orf42	Q9H799	3197 aa		5.18	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PNMA6F	A0A0J9YX94	578 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	LINC01553	A4QN01	128 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PIK3CD	O00329	1044 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	IFIT3	O14879	490 aa	Known RBP	5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SLC27A2	O14975	620 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ZEB2	O60315	1214 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	KPNA6	O60684	536 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PPFIA4	O75335	1185 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	GJB5	O95377	273 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CHRNA1	P02708	482 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PFKM	P08237	780 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SUPT20HL2	P0C7V6	817 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SMIM10L2A	P0DMW4	78 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	SMIM10L2B	P0DMW5	78 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	RFC2	P35250	354 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ERVK-21	P61565	698 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	EXOSC10	Q01780	885 aa	Known RBP	5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	MGAT3	Q09327	533 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PTK7	Q13308	1070 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	CAMK1	Q14012	370 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PLEKHG4	Q58EX7	1191 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	TMEM67	Q5HYA8	995 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	ARHGEF16	Q5VV41	709 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	PPP2R2D	Q66LE6	453 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	FCHSD1	Q86WN1	690 aa		5.17	□□□□□ -1.58
PPP4R1-209	ENST00000578329	HOMER1	Q86YM7	354 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms