RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 F2P00734 622 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 RBL2Q08999 1139 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 MFSD10Q14728 455 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 CREB3L3Q68CJ9 461 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 DEFB128Q7Z7B8 93 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 PHOSPHO2Q8TCD6 241 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 SLC9A7Q96T83 725 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 MLXIPQ9HAP2 919 aa17.24■□□□□ 0.35
MKS1-205ENST00000577315 PIK3CDO00329 1044 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 BAIAP3O94812 1187 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 ATP2A2P16615 1042 aaKnown RBP17.23■□□□□ 0.35
MKS1-205ENST00000577315 ICAM3P32942 547 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 NEDD9Q14511 834 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 KIAA0753Q2KHM9 967 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 GDF6Q6KF10 455 aaPredicted RBP17.23■□□□□ 0.35
MKS1-205ENST00000577315 XRRA1Q6P2D8 792 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 IL31RAQ8NI17 732 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 VWCEQ96DN2 955 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 FTOQ9C0B1 505 aaKnown RBP eCLIP17.23■□□□□ 0.35
MKS1-205ENST00000577315 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
MKS1-205ENST00000577315 SELPP16109 830 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 UBA1P22314 1058 aaKnown RBP17.22■□□□□ 0.35
MKS1-205ENST00000577315 PTK7Q13308 1070 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 SYNE3Q6ZMZ3 975 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 PIBF1Q8WXW3 757 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
MKS1-205ENST00000577315 MYL10Q9BUA6 226 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 HDAC6Q9UBN7 1215 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 CDH23Q9H251 3354 aa17.22■□□□□ 0.35
MKS1-205ENST00000577315 CUL9Q8IWT3 2517 aa17.21■□□□□ 0.35
MKS1-205ENST00000577315 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
MKS1-205ENST00000577315 FIBPO43427 364 aa17.21■□□□□ 0.35
MKS1-205ENST00000577315 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
MKS1-205ENST00000577315 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.35
MKS1-205ENST00000577315 PPP1R13LQ8WUF5 828 aa17.21■□□□□ 0.35
MKS1-205ENST00000577315 NOP56O00567 594 aaKnown RBP17.2■□□□□ 0.34
MKS1-205ENST00000577315 ZNF286BP0CG31 522 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 MRPS9P82933 396 aaKnown RBP17.2■□□□□ 0.34
MKS1-205ENST00000577315 SP2Q02086 613 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 PCNX4Q63HM2 1172 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 LRRC8DQ7L1W4 858 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 NLRX1Q86UT6 975 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
MKS1-205ENST00000577315 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 GIMAP8Q8ND71 665 aaPredicted RBP17.2■□□□□ 0.34
MKS1-205ENST00000577315 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 USP26Q9BXU7 913 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 PRDM12Q9H4Q4 367 aa17.2■□□□□ 0.34
MKS1-205ENST00000577315 YBX2Q9Y2T7 364 aaKnown RBP17.2■□□□□ 0.34
MKS1-205ENST00000577315 PTPRSQ13332 1948 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 MEIS2O14770 477 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 EFCAB14O75071 495 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 PLEKHA8P1O95397 391 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 CKBP12277 381 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 KRT32Q14532 448 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 PPP2R2DQ66LE6 453 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 TEX2Q8IWB9 1127 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 CDHR1Q96JP9 859 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 SENP7Q9BQF6 1050 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 C16orf70Q9BSU1 422 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
MKS1-205ENST00000577315 RBM28Q9NW13 759 aaKnown RBP17.19■□□□□ 0.34
MKS1-205ENST00000577315 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 A0A0C4DFX4 3053 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 H3BRB1 525 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 CDC45O75419 566 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 CXCL10P02778 98 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 KCNJ6P48051 423 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 RABGGTBP53611 331 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 TSGA10IPQ3SY00 556 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 USP17L6PQ6QN14 398 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 DHX38Q92620 1227 aaKnown RBP17.18■□□□□ 0.34
MKS1-205ENST00000577315 SYMPKQ92797 1274 aaKnown RBP17.18■□□□□ 0.34
MKS1-205ENST00000577315 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.34
MKS1-205ENST00000577315 TUT1Q9H6E5 874 aaKnown RBP17.18■□□□□ 0.34
MKS1-205ENST00000577315 EHMT1Q9H9B1 1298 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
MKS1-205ENST00000577315 UNC80Q8N2C7 3258 aa17.17■□□□□ 0.34
MKS1-205ENST00000577315 C17orf102A2RUQ5 167 aa17.17■□□□□ 0.34
MKS1-205ENST00000577315 LGALS2P05162 132 aa17.17■□□□□ 0.34
MKS1-205ENST00000577315 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
MKS1-205ENST00000577315 RXRAP19793 462 aa17.17■□□□□ 0.34
MKS1-205ENST00000577315 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
MKS1-205ENST00000577315 GPRASP2Q96D09 838 aa17.17■□□□□ 0.34
MKS1-205ENST00000577315 ZFP91Q96JP5 570 aaPredicted RBP17.17■□□□□ 0.34
MKS1-205ENST00000577315 COL25A1Q9BXS0 654 aaPredicted RBP17.17■□□□□ 0.34
MKS1-205ENST00000577315 ZNF215Q9UL58 517 aaPredicted RBP17.17■□□□□ 0.34
MKS1-205ENST00000577315 EMSYQ7Z589 1322 aa17.17■□□□□ 0.34
MKS1-205ENST00000577315 ABHD14A-ACY1A0A1B0GW23 586 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 SPDYE3A6NKU9 549 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 MAFGO15525 162 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms