RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NR3C2P08235 984 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 HOXD8P13378 290 aaPredicted RBP15.58■□□□□ 0.08
COPS3-214ENST00000577246 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
COPS3-214ENST00000577246 THPOP40225 353 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 TCTN1Q2MV58 587 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 EPC2Q52LR7 807 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 TRAF7Q6Q0C0 670 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 ADGRF4Q8IZF3 695 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 BANK1Q8NDB2 785 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 DBF4BQ8NFT6 615 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 SEPT8Q92599 483 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 PABPC5Q96DU9 382 aaKnown RBP15.58■□□□□ 0.08
COPS3-214ENST00000577246 UPF3BQ9BZI7 483 aaKnown RBP15.58■□□□□ 0.08
COPS3-214ENST00000577246 PXMP2Q9NR77 195 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 MAP3K20Q9NYL2 800 aaKnown RBP15.58■□□□□ 0.08
COPS3-214ENST00000577246 COL20A1Q9P218 1284 aa15.58■□□□□ 0.08
COPS3-214ENST00000577246 A0A0D9SFI3 127 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 H3BNC9 293 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 MBTPS1Q14703 1052 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 PLEKHG4Q58EX7 1191 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.57■□□□□ 0.08
COPS3-214ENST00000577246 SERINC5Q86VE9 423 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 TBC1D5Q92609 795 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 FAM227BQ96M60 508 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 SPATA33Q96N06 139 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 NSUN3Q9H649 340 aaKnown RBP15.57■□□□□ 0.08
COPS3-214ENST00000577246 CCDC171Q6TFL3 1326 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 SALL3Q9BXA9 1300 aa15.57■□□□□ 0.08
COPS3-214ENST00000577246 TET1Q8NFU7 2136 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 C17orf102A2RUQ5 167 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 H3BQ06 376 aaPredicted RBP15.56■□□□□ 0.08
COPS3-214ENST00000577246 ZNF213O14771 459 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 CFBP00751 764 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 TGFB3P10600 412 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 GPM6BQ13491 265 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 QRICH1Q2TAL8 776 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 CELF3Q5SZQ8 465 aaKnown RBP15.56■□□□□ 0.08
COPS3-214ENST00000577246 TBC1D10CQ8IV04 446 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 SAMD3Q8N6K7 520 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 APBB2Q92870 758 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 POP1Q99575 1024 aaKnown RBP15.56■□□□□ 0.08
COPS3-214ENST00000577246 AMNQ9BXJ7 453 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 CPVLQ9H3G5 476 aa15.56■□□□□ 0.08
COPS3-214ENST00000577246 PTPRSQ13332 1948 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 SIP14410 1827 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 PARP1P09874 1014 aaKnown RBP15.55■□□□□ 0.08
COPS3-214ENST00000577246 GNAT1P11488 350 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 HSD17B4P51659 736 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 ZNF200P98182 395 aaPredicted RBP15.55■□□□□ 0.08
COPS3-214ENST00000577246 TRAF1Q13077 416 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 MKRN4PQ13434 485 aaPredicted RBP15.55■□□□□ 0.08
COPS3-214ENST00000577246 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 MYSM1Q5VVJ2 828 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 EP400NLQ6ZTU2 488 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 ATP6V0A1Q93050 837 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 WNT8BQ93098 351 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 TOP1MTQ969P6 601 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 ZKSCAN3Q9BRR0 538 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 RWDD3Q9Y3V2 267 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 PCDHB15Q9Y5E8 787 aa15.55■□□□□ 0.08
COPS3-214ENST00000577246 NEDD4P46934 1319 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 GGPS1O95749 300 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 MYCLP12524 364 aaPredicted RBP15.54■□□□□ 0.08
COPS3-214ENST00000577246 MRE11P49959 708 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 PDE1AP54750 535 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 GHRHRQ02643 423 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 ZP2Q05996 745 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 NMIQ13287 307 aaPredicted RBP15.54■□□□□ 0.08
COPS3-214ENST00000577246 COL19A1Q14993 1142 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 HSDL1Q3SXM5 330 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 TCEAL5Q5H9L2 206 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
COPS3-214ENST00000577246 ZNF589Q86UQ0 364 aaPredicted RBP15.54■□□□□ 0.08
COPS3-214ENST00000577246 ADHFE1Q8IWW8 467 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 TMEM192Q8IY95 271 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 ANKS1AQ92625 1134 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 ZSCAN10Q96SZ4 725 aaPredicted RBP15.54■□□□□ 0.08
COPS3-214ENST00000577246 PDCD2LQ9BRP1 358 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 MLXIPQ9HAP2 919 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 COL4A6Q14031 1691 aa15.54■□□□□ 0.08
COPS3-214ENST00000577246 POTEB3A0JP26 581 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 TRIM6-TRIM34B2RNG4 842 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 H3BRB1 525 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 KDM4AO75164 1064 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 CCND2P30279 289 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 POTEBQ6S5H4 581 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 STOX1Q6ZVD7 989 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 MFSD14AQ96MC6 490 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 C16orf70Q9BSU1 422 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 C11orf84Q9BUA3 381 aaPredicted RBP15.53■□□□□ 0.08
COPS3-214ENST00000577246 IFIH1Q9BYX4 1025 aaKnown RBP15.53■□□□□ 0.08
COPS3-214ENST00000577246 LMAN2LQ9H0V9 348 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 TUT1Q9H6E5 874 aaKnown RBP15.53■□□□□ 0.08
COPS3-214ENST00000577246 JMJD4Q9H9V9 463 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 VAT1LQ9HCJ6 419 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 CLDND1Q9NY35 253 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 PIEZO1Q92508 2521 aa15.53■□□□□ 0.08
COPS3-214ENST00000577246 NOP56O00567 594 aaKnown RBP15.52■□□□□ 0.08
COPS3-214ENST00000577246 UPP2O95045 317 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms