RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 MRPL11Q9Y3B7 192 aaKnown RBP14.01□□□□□ -0.17
PRPF8-215ENST00000576958 PCDHA1Q9Y5I3 950 aa14.01□□□□□ -0.17
PRPF8-215ENST00000576958 BRWD1Q9NSI6 2320 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 PALM3A6NDB9 673 aaPredicted RBP14□□□□□ -0.17
PRPF8-215ENST00000576958 ZBTB5O15062 677 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 TLL1O43897 1013 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 KPNA6O60684 536 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 GGPS1O95749 300 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 F2P00734 622 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 ACTN1P12814 892 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 COL9A1P20849 921 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 UBA1P22314 1058 aaKnown RBP14□□□□□ -0.17
PRPF8-215ENST00000576958 RFC2P35250 354 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 SEMA3FQ13275 785 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 DGKDQ16760 1214 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 TTC22Q5TAA0 569 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 SESTD1Q86VW0 696 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 SKAP1Q86WV1 359 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 DHX37Q8IY37 1157 aaKnown RBP14□□□□□ -0.17
PRPF8-215ENST00000576958 AMNQ9BXJ7 453 aa14□□□□□ -0.17
PRPF8-215ENST00000576958 EIF3JO75822 258 aaKnown RBP13.99□□□□□ -0.17
PRPF8-215ENST00000576958 CASTP20810 708 aaKnown RBP13.99□□□□□ -0.17
PRPF8-215ENST00000576958 GRM4Q14833 912 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 CELF3Q5SZQ8 465 aaKnown RBP13.99□□□□□ -0.17
PRPF8-215ENST00000576958 TICAM2Q86XR7 235 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 TRIM50Q86XT4 487 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 MCF2L2Q86YR7 1114 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 RAB11FIP4Q86YS3 637 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 C7orf31Q8N865 590 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 PPTC7Q8NI37 304 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 AFAP1L1Q8TED9 768 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 SPATA33Q96N06 139 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 IWS1Q96ST2 819 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 MPHOSPH6Q99547 160 aaKnown RBP13.99□□□□□ -0.17
PRPF8-215ENST00000576958 C16orf70Q9BSU1 422 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 KRT23Q9C075 422 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 RTEL1Q9NZ71 1219 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 PNMA2Q9UL42 364 aa13.99□□□□□ -0.17
PRPF8-215ENST00000576958 CXCL10P02778 98 aa13.98□□□□□ -0.17
PRPF8-215ENST00000576958 CHMLP26374 656 aa13.98□□□□□ -0.17
PRPF8-215ENST00000576958 MRPS9P82933 396 aaKnown RBP13.98□□□□□ -0.17
PRPF8-215ENST00000576958 GHRHRQ02643 423 aa13.98□□□□□ -0.17
PRPF8-215ENST00000576958 VSIG10LQ86VR7 867 aa13.98□□□□□ -0.17
PRPF8-215ENST00000576958 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
PRPF8-215ENST00000576958 CAGE1Q8TC20 777 aa13.98□□□□□ -0.17
PRPF8-215ENST00000576958 PHOSPHO2Q8TCD6 241 aa13.98□□□□□ -0.17
PRPF8-215ENST00000576958 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
PRPF8-215ENST00000576958 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 LINC01553A4QN01 128 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 E7EWF7 191 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 IFIT3O14879 490 aaKnown RBP13.97□□□□□ -0.17
PRPF8-215ENST00000576958 CTSHP09668 335 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 HOXD8P13378 290 aaPredicted RBP13.97□□□□□ -0.17
PRPF8-215ENST00000576958 KCNJ6P48051 423 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 SP4Q02446 784 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 RBL2Q08999 1139 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
PRPF8-215ENST00000576958 LAMC2Q13753 1193 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 CCDC178Q5BJE1 867 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 C17orf80Q9BSJ5 609 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 EPHX3Q9H6B9 360 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 RIOX1Q9H6W3 641 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 SUGCTQ9HAC7 445 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 CD320Q9NPF0 282 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 MICAL3Q7RTP6 2002 aa13.97□□□□□ -0.17
PRPF8-215ENST00000576958 B4DLN1 442 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 HIP1O00291 1037 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 TREHO43280 583 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 LGR5O75473 907 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 BAIAP3O94812 1187 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 RXRAP19793 462 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 POU3F3P20264 500 aaPredicted RBP13.96□□□□□ -0.17
PRPF8-215ENST00000576958 THPOP40225 353 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 MRPL12P52815 198 aaKnown RBP13.96□□□□□ -0.17
PRPF8-215ENST00000576958 TROAPQ12815 778 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 PTK7Q13308 1070 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 USP17L6PQ6QN14 398 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 DBF4BQ8NFT6 615 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 SIP14410 1827 aa13.96□□□□□ -0.17
PRPF8-215ENST00000576958 GJB5O95377 273 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 LGALS2P05162 132 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 SMIM10L2AP0DMW4 78 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 SMIM10L2BP0DMW5 78 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 CYFIP1Q7L576 1253 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 SERINC5Q86VE9 423 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 CCDC155Q8N6L0 562 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 IGDCC4Q8TDY8 1250 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 SETD4Q9NVD3 440 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 ATG2AQ2TAZ0 1938 aa13.95□□□□□ -0.18
PRPF8-215ENST00000576958 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
PRPF8-215ENST00000576958 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
PRPF8-215ENST00000576958 POLR2MP0CAP2 368 aa13.94□□□□□ -0.18
PRPF8-215ENST00000576958 CCND2P30279 289 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms