RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 IRX5P78411 483 aaPredicted RBP17.35■□□□□ 0.37
LITAF-217ENST00000575426 HMGN5P82970 282 aaKnown RBP17.35■□□□□ 0.37
LITAF-217ENST00000575426 ARHGAP4P98171 946 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 NEDD9Q14511 834 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 FAM184AQ8NB25 1140 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 GPRASP2Q96D09 838 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 PHF20Q9BVI0 1012 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 BRMS1Q9HCU9 246 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 STARD7Q9NQZ5 370 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 KCNJ14Q9UNX9 436 aa17.35■□□□□ 0.37
LITAF-217ENST00000575426 A0A1W2PQ45 241 aaPredicted RBP17.34■□□□□ 0.37
LITAF-217ENST00000575426 A0A1W2PQY0 241 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 SPATA31C2B4DYI2 1134 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 EVI5O60447 810 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 KPNA6O60684 536 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 CABYRO75952 493 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 GGPS1O95749 300 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 MYL3P08590 195 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 PTGS1P23219 599 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 ATN1P54259 1190 aaPredicted RBP17.34■□□□□ 0.37
LITAF-217ENST00000575426 ST3GAL1Q11201 340 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 MTMR1Q13613 665 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 CCSAPQ6IQ19 270 aaPredicted RBP17.34■□□□□ 0.37
LITAF-217ENST00000575426 SLC39A5Q6ZMH5 540 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 DAGLBQ8NCG7 672 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 GIMAP8Q8ND71 665 aaPredicted RBP17.34■□□□□ 0.37
LITAF-217ENST00000575426 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 TMX3Q96JJ7 454 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 MXRA8Q9BRK3 442 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 JADE2Q9NQC1 790 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 UBIAD1Q9Y5Z9 338 aa17.34■□□□□ 0.37
LITAF-217ENST00000575426 PDE4DIPQ5VU43 2346 aa17.33■□□□□ 0.37
LITAF-217ENST00000575426 CTAGE5O15320 804 aa17.33■□□□□ 0.36
LITAF-217ENST00000575426 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.36
LITAF-217ENST00000575426 ARHGAP1Q07960 439 aa17.33■□□□□ 0.36
LITAF-217ENST00000575426 CELF3Q5SZQ8 465 aaKnown RBP17.33■□□□□ 0.36
LITAF-217ENST00000575426 KIF3AQ9Y496 699 aa17.33■□□□□ 0.36
LITAF-217ENST00000575426 NR2E3Q9Y5X4 410 aa17.33■□□□□ 0.36
LITAF-217ENST00000575426 ELP1O95163 1332 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 CCDC194A0A1B0GVG4 234 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 A6NJR5 290 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 ADAMTS3O15072 1205 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 SORBS3O60504 671 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 CD2BP2O95400 341 aaKnown RBP17.32■□□□□ 0.36
LITAF-217ENST00000575426 CYP3A4P08684 503 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 ITGB5P18084 799 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 KRT2P35908 639 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 FOSBP53539 338 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 SP2Q02086 613 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 NONOQ15233 471 aaKnown RBP eCLIP17.32■□□□□ 0.36
LITAF-217ENST00000575426 DGKDQ16760 1214 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 CEP55Q53EZ4 464 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 MYSM1Q5VVJ2 828 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 CXCL17Q6UXB2 119 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 AFG1LQ8WV93 481 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 EMID1Q96A84 441 aaPredicted RBP17.32■□□□□ 0.36
LITAF-217ENST00000575426 SPATA33Q96N06 139 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
LITAF-217ENST00000575426 TNRC18O15417 2968 aaPredicted RBP17.32■□□□□ 0.36
LITAF-217ENST00000575426 A0A0U1RQG5 324 aaPredicted RBP17.31■□□□□ 0.36
LITAF-217ENST00000575426 NOP56O00567 594 aaKnown RBP17.31■□□□□ 0.36
LITAF-217ENST00000575426 USP11P51784 963 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 SAFBQ15424 915 aaKnown RBP eCLIP17.31■□□□□ 0.36
LITAF-217ENST00000575426 LRRC26Q2I0M4 334 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 CYFIP1Q7L576 1253 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 NIPA1Q7RTP0 329 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 PPTC7Q8NI37 304 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 MTG1Q9BT17 334 aaPredicted RBP17.31■□□□□ 0.36
LITAF-217ENST00000575426 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 ATP11BQ9Y2G3 1177 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.31■□□□□ 0.36
LITAF-217ENST00000575426 KAT6AQ92794 2004 aa17.31■□□□□ 0.36
LITAF-217ENST00000575426 M0R2N6 131 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 MMP3P08254 477 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 RTP1P59025 263 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 KRT40Q6A162 431 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 METTL7BQ6UX53 244 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 TBCKQ8TEA7 893 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 SDF4Q9BRK5 362 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 SEZ6LQ9BYH1 1024 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 KCNH7Q9NS40 1196 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 PKD2L1Q9P0L9 805 aa17.3■□□□□ 0.36
LITAF-217ENST00000575426 MROH7Q68CQ1 1323 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 MEIS1O00470 390 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 PPFIA4O75335 1185 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 MMP1P03956 469 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 PURAQ00577 322 aaKnown RBP17.29■□□□□ 0.36
LITAF-217ENST00000575426 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
LITAF-217ENST00000575426 ITGA7Q13683 1181 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 NPY5RQ15761 445 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 C1orf53Q5VUE5 145 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 CYP2W1Q8TAV3 490 aa17.29■□□□□ 0.36
LITAF-217ENST00000575426 SCN10AQ9Y5Y9 1956 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 ARVCFO00192 962 aa17.28■□□□□ 0.36
LITAF-217ENST00000575426 ATP9AO75110 1047 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms