RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CREG2Q8IUH2 290 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 FAM71BQ8TC56 605 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 SMCR8Q8TEV9 937 aaPredicted RBP9.91□□□□□ -0.82
NCBP3-204ENST00000574911 PSTPIP2Q9H939 334 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MLXIPQ9HAP2 919 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 PANK4Q9NVE7 773 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 VPS18Q9P253 973 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 PCDHA2Q9Y5H9 948 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 KDM3AQ9Y4C1 1321 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 AARSP49588 968 aaKnown RBP eCLIP9.91□□□□□ -0.82
NCBP3-204ENST00000574911 FKBP3Q00688 224 aaKnown RBP9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MAP9Q49MG5 647 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 CDC42EP5Q6NZY7 148 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 KCTD1Q719H9 257 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 CAGE1Q8TC20 777 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 GJA10Q969M2 543 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 CEP63Q96MT8 703 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MXD3Q9BW11 206 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 NT5C3AQ9H0P0 336 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 ACBD3Q9H3P7 528 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 JADE2Q9NQC1 790 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 PCDHA12Q9UN75 941 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 FAN1Q9Y2M0 1017 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 CAPN6Q9Y6Q1 641 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 SPATA31A6Q5VVP1 1343 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 SSU72P8A0A1W2PR75 194 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MOCS3O95396 460 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 HLA-DOAP06340 250 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MUM1L1Q5H9M0 696 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 FAM26FQ5R3K3 315 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 HGSNATQ68CP4 663 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 IQCEQ6IPM2 695 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 APOBEC3HQ6NTF7 200 aaKnown RBP9.91□□□□□ -0.82
NCBP3-204ENST00000574911 HHIPL2Q6UWX4 724 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MMGT1Q8N4V1 131 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MBOAT7Q96N66 472 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 GLT8D2Q9H1C3 349 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 EHD4Q9H223 541 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 DEF6Q9H4E7 631 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 MED4Q9NPJ6 270 aa9.91□□□□□ -0.82
NCBP3-204ENST00000574911 RNF216Q9NWF9 866 aaPredicted RBP9.91□□□□□ -0.82
NCBP3-204ENST00000574911 CYP3A7-CYP3A51PA0A087WV96 503 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 E9PMD0 336 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 AKR1B10O60218 316 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 PLA2G4BP0C869 781 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 CYP3A7P24462 503 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 MAGEA1P43355 309 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 ITIH3Q06033 890 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 C2orf54Q08AI8 447 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 CCNI2Q6ZMN8 369 aaPredicted RBP9.9□□□□□ -0.82
NCBP3-204ENST00000574911 ZC3H3Q8IXZ2 948 aaKnown RBP9.9□□□□□ -0.82
NCBP3-204ENST00000574911 CCDC155Q8N6L0 562 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
NCBP3-204ENST00000574911 FGFBP2Q9BYJ0 223 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 ZC3H12CQ9C0D7 883 aaKnown RBP9.9□□□□□ -0.82
NCBP3-204ENST00000574911 KCNMB3Q9NPA1 279 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 BMP2KQ9NSY1 1161 aaPredicted RBP9.9□□□□□ -0.82
NCBP3-204ENST00000574911 ADAMTSL1Q8N6G6 1762 aa9.9□□□□□ -0.82
NCBP3-204ENST00000574911 ZC3H4Q9UPT8 1303 aaKnown RBP9.9□□□□□ -0.83
NCBP3-204ENST00000574911 UBAP1LF5GYI3 381 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 RBAK-RBAKDNI3L0D1 243 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 MPHOSPH10O00566 681 aaKnown RBP9.9□□□□□ -0.83
NCBP3-204ENST00000574911 MARCH6O60337 910 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 NOL4O94818 638 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 GNA14O95837 355 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 SCNN1DP51172 638 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 USP11P51784 963 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 MARSP56192 900 aaKnown RBP9.9□□□□□ -0.83
NCBP3-204ENST00000574911 ATP2B2Q01814 1243 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 CCDC65Q8IXS2 484 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 MKL1Q969V6 931 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 CCDC17Q96LX7 622 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 CEP72Q9P209 647 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 HPCAL4Q9UM19 191 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.83
NCBP3-204ENST00000574911 ARFGEF1Q9Y6D6 1849 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 FRMD3A2A2Y4 597 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 TRAF5O00463 557 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 SYF2O95926 243 aaKnown RBP9.89□□□□□ -0.83
NCBP3-204ENST00000574911 LMAN1P49257 510 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 DOK7Q18PE1 504 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 QRICH1Q2TAL8 776 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 CCDC40Q4G0X9 1142 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 HSP90B2PQ58FF3 399 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 CACNA2D4Q7Z3S7 1137 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 ZFPM1Q8IX07 1006 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 SEPT12Q8IYM1 358 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 COG1Q8WTW3 980 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 DCAF4Q8WV16 495 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 RUBCNQ92622 972 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 CCDC102AQ96A19 550 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 OSBPL9Q96SU4 736 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 NUCKS1Q9H1E3 243 aaKnown RBP9.89□□□□□ -0.83
NCBP3-204ENST00000574911 KCTD10Q9H3F6 313 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 DNAJC18Q9H819 358 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L15C9J2P7 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L13C9JLJ4 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L11C9JVI0 530 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms