RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 LRRC8DQ7L1W4 858 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 HERC6Q8IVU3 1022 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 MICALL1Q8N3F8 863 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 SPATA33Q96N06 139 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 KATNAL1Q9BW62 490 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
CTNS-209ENST00000574776 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 RBAK-RBAKDNI3L0D1 243 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 GGPS1O95749 300 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 F2P00734 622 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 CKBP12277 381 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 CCND2P30279 289 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 SART3Q15020 963 aaKnown RBP17.63■□□□□ 0.41
CTNS-209ENST00000574776 CATIPQ7Z7H3 387 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 IGDCC4Q8TDY8 1250 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 GPKOWQ92917 476 aaPredicted RBP eCLIP17.63■□□□□ 0.41
CTNS-209ENST00000574776 MAP4K1Q92918 833 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 ASB2Q96Q27 587 aa17.63■□□□□ 0.41
CTNS-209ENST00000574776 NBNO60934 754 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 BAIAP3O94812 1187 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 ARHGEF15O94989 841 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 TGFB3P10600 412 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 KCNJ6P48051 423 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 ANTXR2P58335 489 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 MRPS5P82675 430 aaKnown RBP17.62■□□□□ 0.41
CTNS-209ENST00000574776 TMCO2Q7Z6W1 182 aaPredicted RBP17.62■□□□□ 0.41
CTNS-209ENST00000574776 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 MLXIPQ9HAP2 919 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 TANC1Q9C0D5 1861 aa17.62■□□□□ 0.41
CTNS-209ENST00000574776 EPOPA6NHQ4 379 aa17.61■□□□□ 0.41
CTNS-209ENST00000574776 HOXD8P13378 290 aaPredicted RBP17.61■□□□□ 0.41
CTNS-209ENST00000574776 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
CTNS-209ENST00000574776 TAP1Q03518 808 aa17.61■□□□□ 0.41
CTNS-209ENST00000574776 RBL2Q08999 1139 aa17.61■□□□□ 0.41
CTNS-209ENST00000574776 PTK7Q13308 1070 aa17.61■□□□□ 0.41
CTNS-209ENST00000574776 HIC1Q14526 733 aa17.61■□□□□ 0.41
CTNS-209ENST00000574776 MB21D2Q8IYB1 491 aaPredicted RBP17.61■□□□□ 0.41
CTNS-209ENST00000574776 ARNTL2Q8WYA1 636 aa17.61■□□□□ 0.41
CTNS-209ENST00000574776 WNT8BQ93098 351 aa17.61■□□□□ 0.41
CTNS-209ENST00000574776 PRRC2BQ5JSZ5 2229 aaKnown RBP17.61■□□□□ 0.41
CTNS-209ENST00000574776 TLL1O43897 1013 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 PARNO95453 639 aaKnown RBP17.6■□□□□ 0.41
CTNS-209ENST00000574776 CXCL10P02778 98 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 WDR5P61964 334 aaKnown RBP17.6■□□□□ 0.41
CTNS-209ENST00000574776 TCTN1Q2MV58 587 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 TRIM71Q2Q1W2 868 aaKnown RBP17.6■□□□□ 0.41
CTNS-209ENST00000574776 ZNF618Q5T7W0 954 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 CNKSR3Q6P9H4 555 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 C16orf70Q9BSU1 422 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 ZBED2Q9BTP6 218 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 TSPYL2Q9H2G4 693 aaPredicted RBP17.6■□□□□ 0.41
CTNS-209ENST00000574776 RTEL1Q9NZ71 1219 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
CTNS-209ENST00000574776 MTCH2Q9Y6C9 303 aa17.6■□□□□ 0.41
CTNS-209ENST00000574776 TNFRSF10AO00220 468 aa17.59■□□□□ 0.41
CTNS-209ENST00000574776 POU3F3P20264 500 aaPredicted RBP17.59■□□□□ 0.41
CTNS-209ENST00000574776 DEFB103AP81534 67 aa17.59■□□□□ 0.41
CTNS-209ENST00000574776 MRPS9P82933 396 aaKnown RBP17.59■□□□□ 0.41
CTNS-209ENST00000574776 KRT40Q6A162 431 aa17.59■□□□□ 0.41
CTNS-209ENST00000574776 TRAF7Q6Q0C0 670 aa17.59■□□□□ 0.41
CTNS-209ENST00000574776 MYL10Q9BUA6 226 aa17.59■□□□□ 0.41
CTNS-209ENST00000574776 TRANK1O15050 2925 aa17.58■□□□□ 0.41
CTNS-209ENST00000574776 ABHD14A-ACY1A0A1B0GW23 586 aa17.58■□□□□ 0.4
CTNS-209ENST00000574776 H3BRB1 525 aa17.58■□□□□ 0.4
CTNS-209ENST00000574776 GTPBP6O43824 516 aaPredicted RBP17.58■□□□□ 0.4
CTNS-209ENST00000574776 SKIV2LQ15477 1246 aaKnown RBP17.58■□□□□ 0.4
CTNS-209ENST00000574776 SPRED2Q7Z698 418 aa17.58■□□□□ 0.4
CTNS-209ENST00000574776 ZNF654Q8IZM8 581 aa17.58■□□□□ 0.4
CTNS-209ENST00000574776 CTCFLQ8NI51 663 aaPredicted RBP17.58■□□□□ 0.4
CTNS-209ENST00000574776 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
CTNS-209ENST00000574776 LY9Q9HBG7 655 aa17.58■□□□□ 0.4
CTNS-209ENST00000574776 PTPRSQ13332 1948 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 LCHNA4D1U4 455 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 SPATA31C2B4DYI2 1134 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 THPOP40225 353 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 TFF2Q03403 129 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 IKBKEQ14164 716 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 MBTPS1Q14703 1052 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 GNPTABQ3T906 1256 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 USP17L6PQ6QN14 398 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 CASC1Q6TDU7 716 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 CYFIP1Q7L576 1253 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 SMARCC2Q8TAQ2 1214 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 ADAMTS19Q8TE59 1207 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 RRP36Q96EU6 259 aaKnown RBP17.57■□□□□ 0.4
CTNS-209ENST00000574776 MAP3K14Q99558 947 aa17.57■□□□□ 0.4
CTNS-209ENST00000574776 REV3LO60673 3130 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 NCOR1O75376 2440 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 C17orf102A2RUQ5 167 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 NOP56O00567 594 aaKnown RBP17.56■□□□□ 0.4
CTNS-209ENST00000574776 PRC1O43663 620 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 LGALS2P05162 132 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 ICAM3P32942 547 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 KIF5BP33176 963 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 SEMA3FQ13275 785 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 GRB10Q13322 594 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 NEDD9Q14511 834 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 FAM117BQ6P1L5 589 aa17.56■□□□□ 0.4
CTNS-209ENST00000574776 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms