RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CYB5R4Q7L1T6 521 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 FERMT2Q96AC1 680 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 GDF15Q99988 308 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 PRO3102Q9H379 93 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 VAT1LQ9HCJ6 419 aa8.68□□□□□ -1.02
NUP88-205ENST00000572809 ADD3Q9UEY8 706 aaKnown RBP8.68□□□□□ -1.02
NUP88-205ENST00000572809 ERICH2A1L162 156 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 PTPDC1A2A3K4 754 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 IFIT3O14879 490 aaKnown RBP8.67□□□□□ -1.02
NUP88-205ENST00000572809 CEP290O15078 2479 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 GPR37L1O60883 481 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 ADAMTS4O75173 837 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 DUSP11O75319 330 aaKnown RBP8.67□□□□□ -1.02
NUP88-205ENST00000572809 JUNDP17535 347 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 BMP8BP34820 402 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 RTP1P59025 263 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 SEC23AQ15436 765 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 PTPRNQ16849 979 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 ASPRV1Q53RT3 343 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 RNF207Q6ZRF8 634 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 RALYLQ86SE5 291 aaKnown RBP8.67□□□□□ -1.02
NUP88-205ENST00000572809 ADGRF4Q8IZF3 695 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 KLHDC9Q8NEP7 349 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 NCOA7Q8NI08 942 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 CLEC4DQ8WXI8 215 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 LENG1Q96BZ8 264 aaPredicted RBP8.67□□□□□ -1.02
NUP88-205ENST00000572809 PURBQ96QR8 312 aaKnown RBP8.67□□□□□ -1.02
NUP88-205ENST00000572809 TSEN34Q9BSV6 310 aaKnown RBP8.67□□□□□ -1.02
NUP88-205ENST00000572809 KATNBL1Q9H079 304 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 CPVLQ9H3G5 476 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 SPC25Q9HBM1 224 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 PHF24Q9UPV7 400 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 ATP11BQ9Y2G3 1177 aa8.67□□□□□ -1.02
NUP88-205ENST00000572809 RBM8AQ9Y5S9 174 aaKnown RBP8.67□□□□□ -1.02
NUP88-205ENST00000572809 ALPK3Q96L96 1907 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 WDR19Q8NEZ3 1342 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 SYNRGQ9UMZ2 1314 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 A0A1W2PPC1 479 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 KLRF2D3W0D1 207 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 NFIBO00712 420 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 DHX16O60231 1041 aaKnown RBP8.66□□□□□ -1.02
NUP88-205ENST00000572809 C6orf222P0C671 652 aaPredicted RBP8.66□□□□□ -1.02
NUP88-205ENST00000572809 CALML3P27482 149 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 CTHP32929 405 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 FXR1P51114 621 aaKnown RBP eCLIP8.66□□□□□ -1.02
NUP88-205ENST00000572809 GJA9P57773 515 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 TNFAIP2Q03169 654 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 SART3Q15020 963 aaKnown RBP8.66□□□□□ -1.02
NUP88-205ENST00000572809 KCNA10Q16322 511 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 USH1GQ495M9 461 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 IQSEC1Q6DN90 963 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 NOL8Q76FK4 1167 aaKnown RBP8.66□□□□□ -1.02
NUP88-205ENST00000572809 EEPD1Q7L9B9 569 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 CHST3Q7LGC8 479 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 STAG2Q8N3U4 1231 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 PCSK9Q8NBP7 692 aaKnown RBP8.66□□□□□ -1.02
NUP88-205ENST00000572809 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 MORC4Q8TE76 937 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 NUP133Q8WUM0 1156 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 ESYT1Q9BSJ8 1104 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 MAF1Q9H063 256 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 JMJD4Q9H9V9 463 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 PRKAG2Q9UGJ0 569 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 FRMPD3Q5JV73 1810 aa8.66□□□□□ -1.02
NUP88-205ENST00000572809 ASTN1O14525 1302 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 LOC102724159A0A0B4J2E5 919 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 A0A1W2PQ45 241 aaPredicted RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 A0A1W2PQY0 241 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 ADCY6O43306 1168 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 MAGEA10P43363 369 aaPredicted RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 ALDH5A1P51649 535 aaPredicted RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 ACLYP53396 1101 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 RPS6P62753 249 aaKnown RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 NR1H3Q13133 447 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 WTAPQ15007 396 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 SNX17Q15036 470 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 PWP2Q15269 919 aaKnown RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 CDC37Q16543 378 aaPredicted RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 BMP2KLQ5H9B9 411 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 GNASQ5JWF2 1037 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 CCSAPQ6IQ19 270 aaPredicted RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 TAPT1Q6NXT6 567 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 STOX1Q6ZVD7 989 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 SKAP1Q86WV1 359 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 FBXO11Q86XK2 927 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 KCTD17Q8N5Z5 321 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 ARMC2Q8NEN0 867 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 DNERQ8NFT8 737 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 IGDCC4Q8TDY8 1250 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 ADAMTS19Q8TE59 1207 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 TBC1D5Q92609 795 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 VTI1AQ96AJ9 217 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 MPHOSPH6Q99547 160 aaKnown RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 LBHD1Q9BQE6 289 aaPredicted RBP8.65□□□□□ -1.02
NUP88-205ENST00000572809 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 PPP1R12CQ9BZL4 782 aa8.65□□□□□ -1.02
NUP88-205ENST00000572809 UBE2OQ9C0C9 1292 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms