RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DNA2P51530 1060 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 KIAA0895Q8NCT3 520 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 KIF3CO14782 793 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 PPIP5K2O43314 1243 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 PLCG1P19174 1290 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 DRD4P21917 467 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 ASIC1P78348 528 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 GIGYF2Q6Y7W6 1299 aaKnown RBP18.51■□□□□ 0.55
LITAF-209ENST00000571688 HOOK2Q96ED9 719 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 NOD2Q9HC29 1040 aa18.51■□□□□ 0.55
LITAF-209ENST00000571688 MYH7BA7E2Y1 1941 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 IRS4O14654 1257 aaPredicted RBP18.5■□□□□ 0.55
LITAF-209ENST00000571688 BACH1O14867 736 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 ORC4O43929 436 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 KLHL7Q8IXQ5 586 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 CEP120Q8N960 986 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 CES2O00748 559 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 FGRP09769 529 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 GBP2P32456 591 aaPredicted RBP18.5■□□□□ 0.55
LITAF-209ENST00000571688 TDRD12Q587J7 1177 aaKnown RBP18.5■□□□□ 0.55
LITAF-209ENST00000571688 RCSD1Q6JBY9 416 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 ADGRA1Q86SQ6 560 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 PCDHA4Q9UN74 947 aa18.5■□□□□ 0.55
LITAF-209ENST00000571688 PACSIN2Q9UNF0 486 aaPredicted RBP18.5■□□□□ 0.55
LITAF-209ENST00000571688 ANKRD36CQ5JPF3 1778 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 FRMD3A2A2Y4 597 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 SNAP23O00161 211 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 KLRC1P26715 233 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 PPARDQ03181 441 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 MSL1Q68DK7 614 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 CNNM4Q6P4Q7 775 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 ARHGAP27Q6ZUM4 889 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 CUL5Q93034 780 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 EBF2Q9HAK2 575 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 NOVA2Q9UNW9 492 aaKnown RBP18.49■□□□□ 0.55
LITAF-209ENST00000571688 F8W031 263 aaPredicted RBP18.49■□□□□ 0.55
LITAF-209ENST00000571688 M0R2N6 131 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 ATP2C2O75185 946 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 RNASE9P60153 205 aaKnown RBP18.49■□□□□ 0.55
LITAF-209ENST00000571688 IRX1P78414 480 aaPredicted RBP18.49■□□□□ 0.55
LITAF-209ENST00000571688 EHHADHQ08426 723 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 ACCSLQ4AC99 568 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 ODF2Q5BJF6 829 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 RASGRP4Q8TDF6 673 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 NEUROG2Q9H2A3 272 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 SLC24A3Q9HC58 644 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 BCCIPQ9P287 314 aaKnown RBP eCLIP18.49■□□□□ 0.55
LITAF-209ENST00000571688 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
LITAF-209ENST00000571688 PHF20L1A8MW92 1017 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 PPP1R12BO60237 982 aaPredicted RBP18.48■□□□□ 0.55
LITAF-209ENST00000571688 RPSAP08865 295 aaKnown RBP18.48■□□□□ 0.55
LITAF-209ENST00000571688 CYP7A1P22680 504 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 PRPHP41219 470 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 MTMR3Q13615 1198 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 NAA25Q14CX7 972 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 C11orf91Q3C1V1 193 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 CPLX4Q7Z7G2 160 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 CABP7Q86V35 215 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 STAG2Q8N3U4 1231 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 RSRC1Q96IZ7 334 aaKnown RBP18.48■□□□□ 0.55
LITAF-209ENST00000571688 LUC7LQ9NQ29 371 aaKnown RBP18.48■□□□□ 0.55
LITAF-209ENST00000571688 CYP2D7A0A087X1C5 515 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 HLFQ16534 295 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 SLC9C1Q4G0N8 1177 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 KIRREL3Q8IZU9 778 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 SCFD2Q8WU76 684 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.48■□□□□ 0.55
LITAF-209ENST00000571688 LRP2BPQ9P2M1 347 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 FBXL5Q9UKA1 691 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 MYH4Q9Y623 1939 aa18.48■□□□□ 0.55
LITAF-209ENST00000571688 LAD1O00515 517 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 TLR2O60603 784 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 PDE8AO60658 829 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 SERPING1P05155 500 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
LITAF-209ENST00000571688 NAIF1Q69YI7 327 aaPredicted RBP18.47■□□□□ 0.55
LITAF-209ENST00000571688 CRELD2Q6UXH1 353 aaPredicted RBP18.47■□□□□ 0.55
LITAF-209ENST00000571688 SYN2Q92777 582 aaPredicted RBP18.47■□□□□ 0.55
LITAF-209ENST00000571688 HPS3Q969F9 1004 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 SH3GLB2Q9NR46 395 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 CCT8L1PA6NM43 557 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 DCDC2CA8MYV0 355 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 TRIM37O94972 964 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 MAGOHP61326 146 aaKnown RBP18.47■□□□□ 0.55
LITAF-209ENST00000571688 HIBCHQ6NVY1 386 aaPredicted RBP18.47■□□□□ 0.55
LITAF-209ENST00000571688 DDX42Q86XP3 938 aaKnown RBP eCLIP18.47■□□□□ 0.55
LITAF-209ENST00000571688 MAGOHBQ96A72 148 aaKnown RBP18.47■□□□□ 0.55
LITAF-209ENST00000571688 SWAP70Q9UH65 585 aa18.47■□□□□ 0.55
LITAF-209ENST00000571688 MAGEB6P1A0A0J9YX57 407 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 CCDC194A0A1B0GVG4 234 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 GSTA1P08263 222 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 KCNMA1Q12791 1236 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 GRIK3Q13003 919 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 CENPTQ96BT3 561 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 AK8Q96MA6 479 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 NUCKS1Q9H1E3 243 aaKnown RBP18.46■□□□□ 0.55
LITAF-209ENST00000571688 SLC39A2Q9NP94 309 aa18.46■□□□□ 0.55
LITAF-209ENST00000571688 BATF3Q9NR55 127 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms