RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CAGE1Q8TC20 777 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 PHOSPHO2Q8TCD6 241 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 AFAP1L1Q8TED9 768 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 SPATA33Q96N06 139 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 UHRF1Q96T88 793 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-203ENST00000570385 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 TSPYL2Q9H2G4 693 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-203ENST00000570385 BCAS3Q9H6U6 928 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 GTF2IRD1Q9UHL9 959 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 MTUS1Q9ULD2 1270 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
CTDNEP1-203ENST00000570385 MTCH2Q9Y6C9 303 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 GCOM1H8Y6P7 765 aaPredicted RBP9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 CYTH3O43739 400 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 GTPBP6O43824 516 aaPredicted RBP9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 GGPS1O95749 300 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 POLR2MP0CAP2 368 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 NT5C2P49902 561 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 WDR5P61964 334 aaKnown RBP9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 GRB10Q13322 594 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 GRM4Q14833 912 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 PGM5Q15124 567 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 HSDL1Q3SXM5 330 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 CELF3Q5SZQ8 465 aaKnown RBP9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 ZNF618Q5T7W0 954 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 VSIG10LQ86VR7 867 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 MTMR8Q96EF0 704 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 RAPGEFL1Q9UHV5 662 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 TANC1Q9C0D5 1861 aa9.99□□□□□ -0.81
CTDNEP1-203ENST00000570385 ERICH2A1L162 156 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 HAS3O00219 553 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 BAIAP3O94812 1187 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 F2P00734 622 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 UBA1P22314 1058 aaKnown RBP9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 CHMLP26374 656 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 CCND2P30279 289 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 MBTPS1Q14703 1052 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 WTAPQ15007 396 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 TRIM71Q2Q1W2 868 aaKnown RBP9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 CNKSR3Q6P9H4 555 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 STOX1Q6ZVD7 989 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 RALYLQ86SE5 291 aaKnown RBP9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 EMID1Q96A84 441 aaPredicted RBP9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 KATNAL1Q9BW62 490 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 MAF1Q9H063 256 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 MLXIPQ9HAP2 919 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 RTEL1Q9NZ71 1219 aa9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 U3KPZ7 1027 aaPredicted RBP9.98□□□□□ -0.81
CTDNEP1-203ENST00000570385 PTPRSQ13332 1948 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 MYO7AQ13402 2215 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 PNMA6FA0A0J9YX94 578 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 E7EWF7 191 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 BMP1P13497 986 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 THPOP40225 353 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 ANTXR2P58335 489 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 SP4Q02446 784 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 GHRHRQ02643 423 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 PTK7Q13308 1070 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 NCOA7Q8NI08 942 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 GDPD5Q8WTR4 605 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 MYL10Q9BUA6 226 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 RIOX1Q9H6W3 641 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 TELO2Q9Y4R8 837 aa9.97□□□□□ -0.81
CTDNEP1-203ENST00000570385 BDP1A6H8Y1 2624 aa9.96□□□□□ -0.81
CTDNEP1-203ENST00000570385 ABHD14A-ACY1A0A1B0GW23 586 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 LPXNO60711 386 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 CXCL10P02778 98 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 CTSHP09668 335 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 HOXD8P13378 290 aaPredicted RBP9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 COL9A1P20849 921 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 MRPS9P82933 396 aaKnown RBP9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 RBL2Q08999 1139 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 TROAPQ12815 778 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 IKBKEQ14164 716 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 CYFIP1Q7L576 1253 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 CATIPQ7Z7H3 387 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 TRIM50Q86XT4 487 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 RAB11FIP4Q86YS3 637 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 CMTR1Q8N1G2 835 aaKnown RBP9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 DBF4BQ8NFT6 615 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 RUFY2Q8WXA3 655 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 ATP6V0A1Q93050 837 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 OSBPL7Q9BZF2 842 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 SUGCTQ9HAC7 445 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 MAP3K20Q9NYL2 800 aaKnown RBP9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 MUC3AQ02505 3323 aa9.96□□□□□ -0.82
CTDNEP1-203ENST00000570385 hCG_1642624A0A1W2PR95 340 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 C17orf102A2RUQ5 167 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 LINC01553A4QN01 128 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 H3BRB1 525 aa9.95□□□□□ -0.82
CTDNEP1-203ENST00000570385 NOP56O00567 594 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms