RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 PSMC4P43686 418 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 SP3Q02447 781 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 KIF22Q14807 665 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 SHC4Q6S5L8 630 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 CCDC73Q6ZRK6 1079 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 NUDT12Q9BQG2 462 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 ARHGAP39Q9C0H5 1083 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 KCNH7Q9NS40 1196 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 SAGE1Q9NXZ1 904 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 PKD2L1Q9P0L9 805 aa17.41■□□□□ 0.38
HERPUD1-219ENST00000570273 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 CTGFP29279 349 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 RGS2P41220 211 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 TECP42680 631 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 FXR2P51116 673 aaKnown RBP eCLIP17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 SPECC1Q5M775 1068 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 ZNF467Q7Z7K2 595 aaPredicted RBP17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 GPT2Q8TD30 523 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 SLC5A5Q92911 643 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 CDHR1Q96JP9 859 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 TRIM47Q96LD4 638 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 RAB34Q9BZG1 259 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 GOLPH3LQ9H4A5 285 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 TTC12Q9H892 705 aaPredicted RBP17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 AGO4Q9HCK5 861 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 DIS3Q9Y2L1 958 aaKnown RBP17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 LRRC37A2A6NM11 1700 aa17.4■□□□□ 0.38
HERPUD1-219ENST00000570273 IPO5O00410 1097 aaKnown RBP17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 CMA1P23946 247 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 ARMCX2Q7L311 632 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 NPLOC4Q8TAT6 608 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 MORC4Q8TE76 937 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 SYMPKQ92797 1274 aaKnown RBP17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 MAML3Q96JK9 1138 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 APBA2Q99767 749 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 PCDHA12Q9UN75 941 aa17.39■□□□□ 0.38
HERPUD1-219ENST00000570273 A0A1B0GVL5 298 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 GPR25O00155 361 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 FOXN1O15353 648 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 GAS7O60861 476 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 RGS20O76081 388 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 PFKFB1P16118 471 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 LIG1P18858 919 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 CYP2B6P20813 491 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 TXLNAP40222 546 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 SKOR2Q2VWA4 1001 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 SEPT14Q6ZU15 432 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 EEPD1Q7L9B9 569 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 FBXO16Q8IX29 292 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 USP6NLQ92738 828 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 AK8Q96MA6 479 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 BEGAINQ9BUH8 593 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 TEKT3Q9BXF9 490 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 POTEMA6NI47 508 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 PP2D1A8MPX8 630 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 TRAK2O60296 914 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 HOXC6P09630 235 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 SEMA3FQ13275 785 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 ITGB3BPQ13352 177 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 NCAPH2Q6IBW4 605 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 USP49Q70CQ1 688 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 CD99L2Q8TCZ2 262 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 EPSTI1Q96J88 318 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 RIT2Q99578 217 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 LRWD1Q9UFC0 647 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 TCEAL9Q9UHQ7 104 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 GJD2Q9UKL4 321 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 VAV3Q9UKW4 847 aa17.38■□□□□ 0.37
HERPUD1-219ENST00000570273 PLXNA1Q9UIW2 1896 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 SPATA31C2B4DYI2 1134 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 DDX39AO00148 427 aaKnown RBP17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 MAFGO15525 162 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 CHMP2AO43633 222 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 PSMD10O75832 226 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 ICAM3P32942 547 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 NDUFA8P51970 172 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 FAM160A1Q05DH4 1040 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 MAMDC4Q6UXC1 1216 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 RASSF8Q8NHQ8 419 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 TINF2Q9BSI4 451 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 TBC1D22BQ9NU19 505 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 SYNGAP1Q96PV0 1343 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 ZSWIM8A7E2V4 1837 aa17.37■□□□□ 0.37
HERPUD1-219ENST00000570273 FAM237AA0A1B0GTK4 181 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 FKTNO75072 461 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 CDC25AP30304 524 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 UBA7P41226 1012 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 PDIA5Q14554 519 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 CABP7Q86V35 215 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 MSL3Q8N5Y2 521 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms