RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 NEDD9Q14511 834 aa26.58■■□□□ 1.85
RAB40C-212ENST00000569575 TAPT1Q6NXT6 567 aa26.58■■□□□ 1.85
RAB40C-212ENST00000569575 RIT2Q99578 217 aa26.58■■□□□ 1.85
RAB40C-212ENST00000569575 FAM184BQ9ULE4 1060 aa26.58■■□□□ 1.85
RAB40C-212ENST00000569575 ZNF865P0CJ78 1059 aaPredicted RBP26.57■■□□□ 1.84
RAB40C-212ENST00000569575 PRPHP41219 470 aa26.57■■□□□ 1.84
RAB40C-212ENST00000569575 ARL6IP4Q66PJ3 421 aaKnown RBP26.57■■□□□ 1.84
RAB40C-212ENST00000569575 SEPT14Q6ZU15 432 aa26.57■■□□□ 1.84
RAB40C-212ENST00000569575 LENG9Q96B70 501 aa26.57■■□□□ 1.84
RAB40C-212ENST00000569575 KCNMB3Q9NPA1 279 aa26.57■■□□□ 1.84
RAB40C-212ENST00000569575 MRVI1Q9Y6F6 885 aa26.57■■□□□ 1.84
RAB40C-212ENST00000569575 TDP2O95551 362 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 AKR1A1P14550 325 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 ELNP15502 786 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 MCM7P33993 719 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 KRT85P78386 507 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 SLC9C1Q4G0N8 1177 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 ANO1Q5XXA6 986 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 CCDC62Q6P9F0 684 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 WDR11Q9BZH6 1224 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 NFASCO94856 1347 aa26.56■■□□□ 1.84
RAB40C-212ENST00000569575 PCNTO95613 3336 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 IPO5O00410 1097 aaKnown RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 SEPT4O43236 478 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 ATP2B1P20020 1258 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 NASPP49321 788 aaPredicted RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 CACNB2Q08289 660 aaPredicted RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 CALCRLQ16602 461 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 DUSP28Q4G0W2 176 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 FBXO16Q8IX29 292 aaPredicted RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 ZNF577Q9BSK1 485 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 AGO4Q9HCK5 861 aaKnown RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 HMX1Q9NP08 348 aaPredicted RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 DDX41Q9UJV9 622 aaKnown RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 ZHX1Q9UKY1 873 aaPredicted RBP26.55■■□□□ 1.84
RAB40C-212ENST00000569575 PCDHB6Q9Y5E3 794 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 MYH15Q9Y2K3 1946 aa26.55■■□□□ 1.84
RAB40C-212ENST00000569575 MARCH6O60337 910 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 YEATS4O95619 227 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 INHAP05111 366 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 TXNP10599 105 aaKnown RBP26.54■■□□□ 1.84
RAB40C-212ENST00000569575 PRKAR2AP13861 404 aaKnown RBP26.54■■□□□ 1.84
RAB40C-212ENST00000569575 ATP2C1P98194 919 aaPredicted RBP26.54■■□□□ 1.84
RAB40C-212ENST00000569575 ZNF174Q15697 407 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 CCDC144BQ3MJ40 725 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 EEPD1Q7L9B9 569 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 CYP2W1Q8TAV3 490 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 SLC5A5Q92911 643 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 MTMR9Q96QG7 549 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 SDF4Q9BRK5 362 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 SCAND2PQ9GZW5 306 aaPredicted RBP26.54■■□□□ 1.84
RAB40C-212ENST00000569575 TCEAL9Q9UHQ7 104 aa26.54■■□□□ 1.84
RAB40C-212ENST00000569575 TNFAIP2Q03169 654 aa26.53■■□□□ 1.84
RAB40C-212ENST00000569575 PTGDRQ13258 359 aa26.53■■□□□ 1.84
RAB40C-212ENST00000569575 SLC39A14Q15043 492 aa26.53■■□□□ 1.84
RAB40C-212ENST00000569575 SF3A1Q15459 793 aaKnown RBP26.53■■□□□ 1.84
RAB40C-212ENST00000569575 FOXD4L5Q5VV16 416 aaPredicted RBP26.53■■□□□ 1.84
RAB40C-212ENST00000569575 ETNPPLQ8TBG4 499 aa26.53■■□□□ 1.84
RAB40C-212ENST00000569575 FOXD4L4Q8WXT5 416 aaPredicted RBP26.53■■□□□ 1.84
RAB40C-212ENST00000569575 EMID1Q96A84 441 aaPredicted RBP26.53■■□□□ 1.84
RAB40C-212ENST00000569575 RAB34Q9BZG1 259 aa26.53■■□□□ 1.84
RAB40C-212ENST00000569575 MSH4O15457 936 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 SLC37A4O43826 429 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 OR52Z1P0C646 297 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 ARP10275 920 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 LAMC2Q13753 1193 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 C4orf32Q8N8J7 132 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 ARMC5Q96C12 935 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 STK24Q9Y6E0 443 aa26.52■■□□□ 1.84
RAB40C-212ENST00000569575 DUSP11O75319 330 aaKnown RBP26.51■■□□□ 1.83
RAB40C-212ENST00000569575 GH1P01241 217 aa26.51■■□□□ 1.83
RAB40C-212ENST00000569575 KCNA2P16389 499 aa26.51■■□□□ 1.83
RAB40C-212ENST00000569575 METTL7BQ6UX53 244 aa26.51■■□□□ 1.83
RAB40C-212ENST00000569575 KCNG4Q8TDN1 519 aa26.51■■□□□ 1.83
RAB40C-212ENST00000569575 FERMT2Q96AC1 680 aa26.51■■□□□ 1.83
RAB40C-212ENST00000569575 USP28Q96RU2 1077 aa26.51■■□□□ 1.83
RAB40C-212ENST00000569575 PCDHA12Q9UN75 941 aa26.51■■□□□ 1.83
RAB40C-212ENST00000569575 PPP6R2O75170 966 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 ADCYAP1R1P41586 468 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 NKX3-2P78367 333 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 KRT76Q01546 638 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 SEMA3FQ13275 785 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 PDIA5Q14554 519 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 CSPP1Q1MSJ5 1256 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 TMEM266Q2M3C6 531 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 PRAMEF19Q5SWL8 479 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 FAM173BQ6P4H8 233 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 CLEC17AQ6ZS10 378 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 POTEDQ86YR6 584 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 RDM1Q8NG50 284 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 TEKT3Q9BXF9 490 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 PDGFCQ9NRA1 345 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 RCOR1Q9UKL0 485 aa26.5■■□□□ 1.83
RAB40C-212ENST00000569575 GAS7O60861 476 aa26.49■■□□□ 1.83
RAB40C-212ENST00000569575 PSMD10O75832 226 aa26.49■■□□□ 1.83
RAB40C-212ENST00000569575 DNM1Q05193 864 aaKnown RBP26.49■■□□□ 1.83
RAB40C-212ENST00000569575 PTPAQ15257 358 aa26.49■■□□□ 1.83
RAB40C-212ENST00000569575 BRDTQ58F21 947 aaPredicted RBP26.49■■□□□ 1.83
RAB40C-212ENST00000569575 CELF3Q5SZQ8 465 aaKnown RBP26.49■■□□□ 1.83
RAB40C-212ENST00000569575 LRCH2Q5VUJ6 765 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms