RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 RBL2Q08999 1139 aa18.49■□□□□ 0.55
EPB42-208ENST00000569204 HSDL1Q3SXM5 330 aa18.49■□□□□ 0.55
EPB42-208ENST00000569204 LRRC8DQ7L1W4 858 aa18.49■□□□□ 0.55
EPB42-208ENST00000569204 ZNF654Q8IZM8 581 aa18.49■□□□□ 0.55
EPB42-208ENST00000569204 ZFP91Q96JP5 570 aaPredicted RBP18.49■□□□□ 0.55
EPB42-208ENST00000569204 SPATA33Q96N06 139 aa18.49■□□□□ 0.55
EPB42-208ENST00000569204 MTA3Q9BTC8 594 aa18.49■□□□□ 0.55
EPB42-208ENST00000569204 LY9Q9HBG7 655 aa18.49■□□□□ 0.55
EPB42-208ENST00000569204 SORBS3O60504 671 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 DDAH1O94760 285 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 BAIAP3O94812 1187 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 UBA1P22314 1058 aaKnown RBP18.48■□□□□ 0.55
EPB42-208ENST00000569204 GPNMBQ14956 572 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 CTCFLQ8NI51 663 aaPredicted RBP18.48■□□□□ 0.55
EPB42-208ENST00000569204 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
EPB42-208ENST00000569204 GPKOWQ92917 476 aaPredicted RBP eCLIP18.48■□□□□ 0.55
EPB42-208ENST00000569204 MYL10Q9BUA6 226 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 SPZ1Q9BXG8 430 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 PRDM6Q9NQX0 595 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 FRMPD4Q14CM0 1322 aa18.48■□□□□ 0.55
EPB42-208ENST00000569204 PRUNE2Q8WUY3 3088 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 PARNO95453 639 aaKnown RBP18.47■□□□□ 0.55
EPB42-208ENST00000569204 CA3P07451 260 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 CKBP12277 381 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 SMARCA1P28370 1054 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 KIF5BP33176 963 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 PTK7Q13308 1070 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 HERC6Q8IVU3 1022 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 LSG1Q9H089 658 aaKnown RBP18.47■□□□□ 0.55
EPB42-208ENST00000569204 MLXIPQ9HAP2 919 aa18.47■□□□□ 0.55
EPB42-208ENST00000569204 PRC1O43663 620 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 STAM2O75886 525 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 MCM5P33992 734 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 MRPS9P82933 396 aaKnown RBP18.46■□□□□ 0.55
EPB42-208ENST00000569204 CCDC85BQ15834 202 aaPredicted RBP18.46■□□□□ 0.55
EPB42-208ENST00000569204 GNPTABQ3T906 1256 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 TJAP1Q5JTD0 557 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 TMTC2Q8N394 836 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 RRP36Q96EU6 259 aaKnown RBP18.46■□□□□ 0.55
EPB42-208ENST00000569204 TMEM87BQ96K49 555 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 LZTS2Q9BRK4 669 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 C16orf70Q9BSU1 422 aa18.46■□□□□ 0.55
EPB42-208ENST00000569204 KIF28PB7ZC32 967 aa18.45■□□□□ 0.54
EPB42-208ENST00000569204 NBNO60934 754 aa18.45■□□□□ 0.54
EPB42-208ENST00000569204 CXCL10P02778 98 aa18.45■□□□□ 0.54
EPB42-208ENST00000569204 ICAM3P32942 547 aa18.45■□□□□ 0.54
EPB42-208ENST00000569204 KCNJ6P48051 423 aa18.45■□□□□ 0.54
EPB42-208ENST00000569204 ZNF200P98182 395 aaPredicted RBP18.45■□□□□ 0.54
EPB42-208ENST00000569204 CNKSR3Q6P9H4 555 aa18.45■□□□□ 0.54
EPB42-208ENST00000569204 INPP4AQ96PE3 977 aaPredicted RBP18.45■□□□□ 0.54
EPB42-208ENST00000569204 ESYT1Q9BSJ8 1104 aa18.45■□□□□ 0.54
EPB42-208ENST00000569204 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 SH2B2O14492 632 aaPredicted RBP18.44■□□□□ 0.54
EPB42-208ENST00000569204 SLC27A2O14975 620 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 GNAQP50148 359 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 WDR5P61964 334 aaKnown RBP18.44■□□□□ 0.54
EPB42-208ENST00000569204 HIC1Q14526 733 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 TRIM71Q2Q1W2 868 aaKnown RBP18.44■□□□□ 0.54
EPB42-208ENST00000569204 TRAF7Q6Q0C0 670 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 NFXL1Q6ZNB6 911 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 ATXN2LQ8WWM7 1075 aaKnown RBP18.44■□□□□ 0.54
EPB42-208ENST00000569204 CUL5Q93034 780 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 WNT8BQ93098 351 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 BCAS3Q9H6U6 928 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 RTEL1Q9NZ71 1219 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 THEGQ9P2T0 379 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 SEC63Q9UGP8 760 aaKnown RBP18.44■□□□□ 0.54
EPB42-208ENST00000569204 CHD9Q3L8U1 2897 aa18.44■□□□□ 0.54
EPB42-208ENST00000569204 VCANP13611 3396 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 SPATA31C2B4DYI2 1134 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 H3BRB1 525 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 PIK3CDO00329 1044 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 PLEKHA8P1O95397 391 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 LGALS2P05162 132 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 SEMA3FQ13275 785 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 COL9A3Q14050 684 aaPredicted RBP18.43■□□□□ 0.54
EPB42-208ENST00000569204 NEDD9Q14511 834 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 ZNF618Q5T7W0 954 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 USP17L6PQ6QN14 398 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 SRBD1Q8N5C6 995 aaKnown RBP18.43■□□□□ 0.54
EPB42-208ENST00000569204 CCDC136Q96JN2 1154 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 TUT1Q9H6E5 874 aaKnown RBP18.43■□□□□ 0.54
EPB42-208ENST00000569204 CERS4Q9HA82 394 aa18.43■□□□□ 0.54
EPB42-208ENST00000569204 KAT6AQ92794 2004 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 ABHD14A-ACY1A0A1B0GW23 586 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 RFXAPO00287 272 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
EPB42-208ENST00000569204 MEIS2O14770 477 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 FIBPO43427 364 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 TLL1O43897 1013 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 ARHGEF15O94989 841 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 CALM1P0DP23 149 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 CALM2P0DP24 149 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 CALM3P0DP25 149 aa18.42■□□□□ 0.54
EPB42-208ENST00000569204 RXRAP19793 462 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms