RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 GGPS1O95749 300 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 SUPT20HL2P0C7V6 817 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 ACRP10323 421 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 TGFB3P10600 412 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 CPA1P15085 419 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 DNAJB2P25686 324 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 CDC27P30260 824 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 HOXC8P31273 242 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 RCAN1P53805 252 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 CCL23P55773 120 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 RBL2Q08999 1139 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 LAMC2Q13753 1193 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 HIC1Q14526 733 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 KRT32Q14532 448 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 DGKDQ16760 1214 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 FAM47CQ5HY64 1035 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 ZNF697Q5TEC3 545 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 PCNX4Q63HM2 1172 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 WWC2Q6AWC2 1192 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 GDF6Q6KF10 455 aaPredicted RBP9.02□□□□□ -0.97
CDH3-209ENST00000569080 KCNV1Q6PIU1 500 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 ZNF365Q70YC5 407 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 FBXL16Q8N461 479 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 HERVK_113Q902F9 699 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 SCLYQ96I15 445 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 AGXT2Q9BYV1 514 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 GTF2IRD1Q9UHL9 959 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 TELO2Q9Y4R8 837 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 SNX14Q9Y5W7 946 aa9.02□□□□□ -0.97
CDH3-209ENST00000569080 TRIP12Q14669 1992 aaPredicted RBP9.01□□□□□ -0.97
CDH3-209ENST00000569080 TMEM265A0A087WTH1 108 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 KLF18A0A0U1RQI7 1052 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 XIRP2A4UGR9 3374 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 RBAK-RBAKDNI3L0D1 243 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 ZBTB43O43298 467 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 FIBPO43427 364 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 SORBS3O60504 671 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 CASTP20810 708 aaKnown RBP9.01□□□□□ -0.97
CDH3-209ENST00000569080 PSEN2P49810 448 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 GPNMBQ14956 572 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 UBE2SQ16763 222 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 RTN1Q16799 776 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 TRIM71Q2Q1W2 868 aaKnown RBP9.01□□□□□ -0.97
CDH3-209ENST00000569080 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 DHX37Q8IY37 1157 aaKnown RBP9.01□□□□□ -0.97
CDH3-209ENST00000569080 CCDC82Q8N4S0 544 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 SMARCC2Q8TAQ2 1214 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 WNT8BQ93098 351 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 FAM161BQ96MY7 647 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 SPATA33Q96N06 139 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 JAKMIP1Q96N16 626 aaKnown RBP9.01□□□□□ -0.97
CDH3-209ENST00000569080 C16orf70Q9BSU1 422 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 PBX4Q9BYU1 374 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 RBM28Q9NW13 759 aaKnown RBP9.01□□□□□ -0.97
CDH3-209ENST00000569080 SIP14410 1827 aa9.01□□□□□ -0.97
CDH3-209ENST00000569080 HSFX4A0A1B0GTS1 333 aaPredicted RBP9□□□□□ -0.97
CDH3-209ENST00000569080 HSFX3A0A1B0GWH4 333 aaPredicted RBP9□□□□□ -0.97
CDH3-209ENST00000569080 GOLGA8AA7E2F4 631 aa9□□□□□ -0.97
CDH3-209ENST00000569080 GOLGA8BA8MQT2 603 aa9□□□□□ -0.97
CDH3-209ENST00000569080 GRXCR1A8MXD5 290 aa9□□□□□ -0.97
CDH3-209ENST00000569080 STXBP3O00186 592 aa9□□□□□ -0.97
CDH3-209ENST00000569080 PPFIA4O75335 1185 aa9□□□□□ -0.97
CDH3-209ENST00000569080 HMGB1P09429 215 aaKnown RBP9□□□□□ -0.97
CDH3-209ENST00000569080 IQCF3P0C7M6 154 aa9□□□□□ -0.97
CDH3-209ENST00000569080 KCNA2P16389 499 aa9□□□□□ -0.97
CDH3-209ENST00000569080 ITGB5P18084 799 aa9□□□□□ -0.97
CDH3-209ENST00000569080 PBX2P40425 430 aa9□□□□□ -0.97
CDH3-209ENST00000569080 MFSD10Q14728 455 aa9□□□□□ -0.97
CDH3-209ENST00000569080 KIAA0753Q2KHM9 967 aa9□□□□□ -0.97
CDH3-209ENST00000569080 GNPTABQ3T906 1256 aa9□□□□□ -0.97
CDH3-209ENST00000569080 XRRA1Q6P2D8 792 aa9□□□□□ -0.97
CDH3-209ENST00000569080 TRAF7Q6Q0C0 670 aa9□□□□□ -0.97
CDH3-209ENST00000569080 METTL7BQ6UX53 244 aa9□□□□□ -0.97
CDH3-209ENST00000569080 HEATR3Q7Z4Q2 680 aa9□□□□□ -0.97
CDH3-209ENST00000569080 CUL5Q93034 780 aa9□□□□□ -0.97
CDH3-209ENST00000569080 SENP7Q9BQF6 1050 aa9□□□□□ -0.97
CDH3-209ENST00000569080 KATNAL1Q9BW62 490 aa9□□□□□ -0.97
CDH3-209ENST00000569080 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
CDH3-209ENST00000569080 PSTPIP2Q9H939 334 aa9□□□□□ -0.97
CDH3-209ENST00000569080 HDAC6Q9UBN7 1215 aa9□□□□□ -0.97
CDH3-209ENST00000569080 MUC3AQ02505 3323 aa9□□□□□ -0.97
CDH3-209ENST00000569080 EPB41L2O43491 1005 aaKnown RBP8.99□□□□□ -0.97
CDH3-209ENST00000569080 ATP9AO75110 1047 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 REC8O95072 547 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 LGALS2P05162 132 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 PFKMP08237 780 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 RPS6KB1P23443 525 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 RFC2P35250 354 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 CLK2P49760 499 aaKnown RBP8.99□□□□□ -0.97
CDH3-209ENST00000569080 EVCP57679 992 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 APOBRQ0VD83 1088 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 NTRK3Q16288 839 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 PTGISQ16647 500 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 BLOC1S2Q6QNY1 142 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 Q6ZUG5 572 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 OTOP2Q7RTS6 562 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 TEX2Q8IWB9 1127 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 CAGE1Q8TC20 777 aa8.99□□□□□ -0.97
CDH3-209ENST00000569080 AFAP1L1Q8TED9 768 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms