RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, human

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNRC6A-215	ENST00000568903	EPOP	A6NHQ4	379 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	CPT1A	P50416	773 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	TCTN1	Q2MV58	587 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	KRT40	Q6A162	431 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SCFD2	Q8WU76	684 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	KAT2B	Q92831	832 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RNF41	Q9H4P4	317 aa	Predicted RBP	11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	KAT14	Q9H8E8	782 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	DIAPH3	Q9NSV4	1193 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	POLR3E	Q9NVU0	708 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MSRA	Q9UJ68	235 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SLC4A7	Q9Y6M7	1214 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	TRANK1	O15050	2925 aa		11.45	□□□□□ -0.58
TNRC6A-215	ENST00000568903	IQCF3	P0C7M6	154 aa		11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PC	P11498	1178 aa	Known RBP	11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	GSPT1	P15170	499 aa	Known RBP	11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	EIF2AK2	P19525	551 aa	Known RBP	11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ARHGAP1	Q07960	439 aa		11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	GPATCH4	Q5T3I0	446 aa	Known RBP	11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	GDF6	Q6KF10	455 aa	Predicted RBP	11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	DNER	Q8NFT8	737 aa		11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	GAS2L1	Q99501	681 aa	Predicted RBP	11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	BCAS3	Q9H6U6	928 aa		11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SLC28A3	Q9HAS3	691 aa		11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MYO9B	Q13459	2157 aa		11.44	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SCN10A	Q9Y5Y9	1956 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	LOC102724159	A0A0B4J2E5	919 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	DHX16	O60231	1041 aa	Known RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	CA3	P07451	260 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MMP3	P08254	477 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PARP1	P09874	1014 aa	Known RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ATP2A2	P16615	1042 aa	Known RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	HOXA13	P31271	388 aa	Predicted RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ZNF200	P98182	395 aa	Predicted RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PTH1R	Q03431	593 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PWP2	Q15269	919 aa	Known RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SEC23A	Q15436	765 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RAB30	Q15771	203 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PPP2R2D	Q66LE6	453 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	IQCA1	Q86XH1	822 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	TICAM2	Q86XR7	235 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RPUSD2	Q8IZ73	545 aa	Known RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MICALL1	Q8N3F8	863 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RGS22	Q8NE09	1264 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	IL31RA	Q8NI17	732 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	DHX38	Q92620	1227 aa	Known RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.43	□□□□□ -0.58	2e-9	■■■■□ 23.8
TNRC6A-215	ENST00000568903	WNT8B	Q93098	351 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RMDN3	Q96TC7	470 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	DSCC1	Q9BVC3	393 aa		11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	DDX41	Q9UJV9	622 aa	Known RBP	11.43	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ABCB11	O95342	1321 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	NKRF	O15226	690 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RGS20	O76081	388 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	CFB	P00751	764 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SUPT20HL2	P0C7V6	817 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MFAP1	P55081	439 aa	Known RBP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	IRX6	P78412	446 aa	Predicted RBP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SP2	Q02086	613 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	TFF2	Q03403	129 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	COL9A3	Q14050	684 aa	Predicted RBP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PTGIS	Q16647	500 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	IMMT	Q16891	758 aa	Known RBP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	TJAP1	Q5JTD0	557 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	NFRKB	Q6P4R8	1299 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	FBXO11	Q86XK2	927 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	NSUN6	Q8TEA1	469 aa	Known RBP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	NECAB3	Q96P71	396 aa	Predicted RBP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	SEZ6L	Q9BYH1	1024 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MAD2L2	Q9UI95	211 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	TELO2	Q9Y4R8	837 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PCDHA11	Q9Y5I1	949 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	TET1	Q8NFU7	2136 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	LAMA4	Q16363	1823 aa		11.42	□□□□□ -0.58
TNRC6A-215	ENST00000568903	LCHN	A4D1U4	455 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	KLRF2	D3W0D1	207 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	GH1	P01241	217 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	NR3C2	P08235	984 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ZNF286B	P0CG31	522 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MYCL	P12524	364 aa	Predicted RBP	11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	STXBP2	Q15833	593 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ASPRV1	Q53RT3	343 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	IFIT1B	Q5T764	474 aa	Known RBP	11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ARHGEF16	Q5VV41	709 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PACS2	Q86VP3	889 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	NLRP7	Q8WX94	980 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ASB2	Q96Q27	587 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	ALG1	Q9BT22	464 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	MTIF3	Q9H2K0	278 aa	Known RBP	11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PXMP2	Q9NR77	195 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	HDAC6	Q9UBN7	1215 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RAPGEFL1	Q9UHV5	662 aa		11.41	□□□□□ -0.58
TNRC6A-215	ENST00000568903	PALM3	A6NDB9	673 aa	Predicted RBP	11.4	□□□□□ -0.58
TNRC6A-215	ENST00000568903	RCCD1	A6NED2	376 aa		11.4	□□□□□ -0.58
TNRC6A-215	ENST00000568903	CYTH3	O43739	400 aa		11.4	□□□□□ -0.58
TNRC6A-215	ENST00000568903	KPNA6	O60684	536 aa		11.4	□□□□□ -0.58
TNRC6A-215	ENST00000568903	NBN	O60934	754 aa		11.4	□□□□□ -0.58
TNRC6A-215	ENST00000568903	CYP21A2	P08686	494 aa		11.4	□□□□□ -0.58
TNRC6A-215	ENST00000568903	HSD17B4	P51659	736 aa		11.4	□□□□□ -0.58

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