RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 FANCLQ9NW38 375 aa12.58□□□□□ -0.4
LYRM1-210ENST00000568820 BCS1LQ9Y276 419 aa12.58□□□□□ -0.4
LYRM1-210ENST00000568820 NFE2L3Q9Y4A8 694 aa12.58□□□□□ -0.4
LYRM1-210ENST00000568820 NFKBIEO00221 500 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 MARCH6O60337 910 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
LYRM1-210ENST00000568820 CAP2P40123 477 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 TECP42680 631 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 TXKP42681 527 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 KCNB1Q14721 858 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
LYRM1-210ENST00000568820 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
LYRM1-210ENST00000568820 UBE2SQ16763 222 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
LYRM1-210ENST00000568820 ZNF658Q5TYW1 1059 aaPredicted RBP12.57□□□□□ -0.4
LYRM1-210ENST00000568820 SPATA1Q5VX52 437 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 MOXD1Q6UVY6 613 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 KIAA1524Q8TCG1 905 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 LRRC27Q9C0I9 530 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 KCNF1Q9H3M0 494 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 LRWD1Q9UFC0 647 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 DDX25Q9UHL0 483 aaKnown RBP12.57□□□□□ -0.4
LYRM1-210ENST00000568820 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 SLC26A4O43511 780 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 PLA2G6O60733 806 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 CDC25AP30304 524 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 PPP1R2P41236 205 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 JAG1P78504 1218 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 STIM1Q13586 685 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 CUL4BQ13620 913 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 RRP1BQ14684 758 aaKnown RBP12.57□□□□□ -0.4
LYRM1-210ENST00000568820 NBPF9Q3BBW0 867 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 KRT79Q5XKE5 535 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 FILIP1Q7Z7B0 1213 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 CCDC150Q8NCX0 1101 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 HSD3B7Q9H2F3 369 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 EVA1BQ9NVM1 165 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 KBTBD4Q9NVX7 518 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 STK17AQ9UEE5 414 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 NRBP1Q9UHY1 535 aa12.57□□□□□ -0.4
LYRM1-210ENST00000568820 SYNRGQ9UMZ2 1314 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 SPDYE3A6NKU9 549 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
LYRM1-210ENST00000568820 NAALADL2Q58DX5 795 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 LRRC8AQ8IWT6 810 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 TSC1Q92574 1164 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 CTAGE1Q96RT6 745 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 NUP88Q99567 741 aaPredicted RBP12.56□□□□□ -0.4
LYRM1-210ENST00000568820 ANO3Q9BYT9 981 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 BLZF1Q9H2G9 400 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
LYRM1-210ENST00000568820 CYP3A7-CYP3A51PA0A087WV96 503 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 PP2D1A8MPX8 630 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 FZD9O00144 591 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 TDP2O95551 362 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 ATP1A3P13637 1013 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 ZNF18P17022 549 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 PLCG1P19174 1290 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 CYP3A7P24462 503 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 ECE1P42892 770 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
LYRM1-210ENST00000568820 RASA3Q14644 834 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
LYRM1-210ENST00000568820 MIGA2Q7L4E1 593 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 SLFN12Q8IYM2 578 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 STAMQ92783 540 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 RWDD2AQ9UIY3 292 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 PRR12Q9ULL5 1215 aa12.55□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 MEIS2O14770 477 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 SLC37A4O43826 429 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 F12P00748 615 aaPredicted RBP12.54□□□□□ -0.4
LYRM1-210ENST00000568820 CASP1P29466 404 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 SPAG1Q07617 926 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 PAK1Q13153 545 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 SPRYD7Q5W111 196 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 USP17L6PQ6QN14 398 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 SV2BQ7L1I2 683 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 TMC6Q7Z403 805 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 SPICE1Q8N0Z3 855 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 ANKRD20A12PQ8NF67 263 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
LYRM1-210ENST00000568820 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
LYRM1-210ENST00000568820 PCDHA12Q9UN75 941 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms