RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 RARBP10826 455 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 PDCP20941 246 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 KRT2P35908 639 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 USP11P51784 963 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 MRPS9P82933 396 aaKnown RBP16.2■□□□□ 0.18
NEIL1-219ENST00000568519 ARHGAP4P98171 946 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEIL1-219ENST00000568519 PRAMEF19Q5SWL8 479 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 KRT40Q6A162 431 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 CCDC62Q6P9F0 684 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 MOXD1Q6UVY6 613 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 FBXO16Q8IX29 292 aaPredicted RBP16.2■□□□□ 0.18
NEIL1-219ENST00000568519 IL31RAQ8NI17 732 aa16.2■□□□□ 0.18
NEIL1-219ENST00000568519 FIBPO43427 364 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 CNGA1P29973 690 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 CIITAP33076 1130 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 JAKMIP3Q5VZ66 844 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 NLRX1Q86UT6 975 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 NAP1L4Q99733 375 aaKnown RBP16.19■□□□□ 0.18
NEIL1-219ENST00000568519 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 UPF3AQ9H1J1 476 aaKnown RBP16.19■□□□□ 0.18
NEIL1-219ENST00000568519 FOXP1Q9H334 677 aaPredicted RBP16.19■□□□□ 0.18
NEIL1-219ENST00000568519 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 GNEQ9Y223 722 aaKnown RBP16.19■□□□□ 0.18
NEIL1-219ENST00000568519 UBIAD1Q9Y5Z9 338 aa16.19■□□□□ 0.18
NEIL1-219ENST00000568519 MYH7BA7E2Y1 1941 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 RGS20O76081 388 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
NEIL1-219ENST00000568519 CST5P28325 142 aaPredicted RBP16.18■□□□□ 0.18
NEIL1-219ENST00000568519 GJB2P29033 226 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 ATN1P54259 1190 aaPredicted RBP16.18■□□□□ 0.18
NEIL1-219ENST00000568519 NONOQ15233 471 aaKnown RBP eCLIP16.18■□□□□ 0.18
NEIL1-219ENST00000568519 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 ARRDC4Q8NCT1 418 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 GIMAP8Q8ND71 665 aaPredicted RBP16.18■□□□□ 0.18
NEIL1-219ENST00000568519 TNFRSF25Q93038 417 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 EMID1Q96A84 441 aaPredicted RBP16.18■□□□□ 0.18
NEIL1-219ENST00000568519 CDX2Q99626 313 aaPredicted RBP16.18■□□□□ 0.18
NEIL1-219ENST00000568519 SENP7Q9BQF6 1050 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 JADE2Q9NQC1 790 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 TMEM260Q9NX78 707 aa16.18■□□□□ 0.18
NEIL1-219ENST00000568519 CCDC194A0A1B0GVG4 234 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 SPATA31C2B4DYI2 1134 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 MEIS1O00470 390 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 SMPD1P17405 629 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 ADCYAP1R1P41586 468 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 GJA9P57773 515 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 SETQ01105 290 aaPredicted RBP16.17■□□□□ 0.18
NEIL1-219ENST00000568519 EEPD1Q7L9B9 569 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 DIS3L2Q8IYB7 885 aaKnown RBP16.17■□□□□ 0.18
NEIL1-219ENST00000568519 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 SENP6Q9GZR1 1112 aaPredicted RBP16.17■□□□□ 0.18
NEIL1-219ENST00000568519 XPNPEP3Q9NQH7 507 aa16.17■□□□□ 0.18
NEIL1-219ENST00000568519 DDX41Q9UJV9 622 aaKnown RBP16.17■□□□□ 0.18
NEIL1-219ENST00000568519 CYP3A7-CYP3A51PA0A087WV96 503 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 DNM1LO00429 736 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 TXNP10599 105 aaKnown RBP16.16■□□□□ 0.18
NEIL1-219ENST00000568519 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
NEIL1-219ENST00000568519 ITGB5P18084 799 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 CYP3A7P24462 503 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.18
NEIL1-219ENST00000568519 BECN1Q14457 450 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 NEDD9Q14511 834 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 C9orf50Q5SZB4 431 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 FAM109BQ6ICB4 259 aaPredicted RBP16.16■□□□□ 0.18
NEIL1-219ENST00000568519 SEPT14Q6ZU15 432 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 RNF180Q86T96 592 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 RASGRP4Q8TDF6 673 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 TBCKQ8TEA7 893 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 MYLIPQ8WY64 445 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 TSEN34Q9BSV6 310 aaKnown RBP16.16■□□□□ 0.18
NEIL1-219ENST00000568519 PDGFCQ9NRA1 345 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 RAPGEFL1Q9UHV5 662 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
NEIL1-219ENST00000568519 ADAMTS3O15072 1205 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 GH1P01241 217 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 ORC2Q13416 577 aaPredicted RBP16.15■□□□□ 0.18
NEIL1-219ENST00000568519 MTMR1Q13613 665 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 LAMC2Q13753 1193 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 SHHQ15465 462 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 BRDTQ58F21 947 aaPredicted RBP16.15■□□□□ 0.18
NEIL1-219ENST00000568519 PPP4R3AQ6IN85 833 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 PCSK9Q8NBP7 692 aaKnown RBP16.15■□□□□ 0.18
NEIL1-219ENST00000568519 KLHDC9Q8NEP7 349 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 MBOAT7Q96N66 472 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 AP5M1Q9H0R1 490 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 DDX49Q9Y6V7 483 aaKnown RBP16.15■□□□□ 0.18
NEIL1-219ENST00000568519 MUC3AQ02505 3323 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 SYNRGQ9UMZ2 1314 aa16.15■□□□□ 0.18
NEIL1-219ENST00000568519 IGLV3-22A0A075B6J6 115 aa16.14■□□□□ 0.17
NEIL1-219ENST00000568519 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.14■□□□□ 0.17
NEIL1-219ENST00000568519 BTBD18B2RXH4 712 aa16.14■□□□□ 0.17
NEIL1-219ENST00000568519 ADCY6O43306 1168 aa16.14■□□□□ 0.17
NEIL1-219ENST00000568519 KPNA6O60684 536 aa16.14■□□□□ 0.17
NEIL1-219ENST00000568519 TRAPPC10P48553 1259 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms