RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 IFIT1BQ5T764 474 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 TAPT1Q6NXT6 567 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 PSRC1Q6PGN9 363 aaPredicted RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 NOP9Q86U38 636 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 OR6J1Q8NGC5 347 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 EXOC6Q8TAG9 804 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 MORC4Q8TE76 937 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 NSUN6Q8TEA1 469 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 SCFD2Q8WU76 684 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 FGD4Q96M96 766 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 CDX2Q99626 313 aaPredicted RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 EPAS1Q99814 870 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 UBA5Q9GZZ9 404 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 HIPK3Q9H422 1215 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 VAT1LQ9HCJ6 419 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 PDGFCQ9NRA1 345 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 ZSWIM5Q9P217 1185 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 NOD1Q9Y239 953 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 MRPL11Q9Y3B7 192 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 SUPT16HQ9Y5B9 1047 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 BAZ2BQ9UIF8 2168 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 ABCB11O95342 1321 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 WDR19Q8NEZ3 1342 aa5.43□□□□□ -1.54
HERPUD1-213ENST00000568358 ANKRD33BA6NCL7 494 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 NFIBO00712 420 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ADCY6O43306 1168 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ATP9BO43861 1147 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 AP1G2O75843 785 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 CD4P01730 458 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 SNHG28P0DPA3 235 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 TXNP10599 105 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ACTN1P12814 892 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 FOSL2P15408 326 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 CSF2RAP15509 400 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 CD46P15529 392 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ITGB8P26012 769 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 CYP2C18P33260 490 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 PSEN2P49810 448 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 MARSP56192 900 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 CHMP4BP1P59074 171 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 RAB30Q15771 203 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 STXBP2Q15833 593 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 CDC37Q16543 378 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 FAM47CQ5HY64 1035 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ARHGEF16Q5VV41 709 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ZNF365Q70YC5 407 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 RALYLQ86SE5 291 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 FBXO11Q86XK2 927 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 TBC1D10CQ8IV04 446 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 FAM126BQ8IXS8 530 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ADGRF4Q8IZF3 695 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 SAMD3Q8N6K7 520 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 MAFAQ8NHW3 353 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 CLEC4DQ8WXI8 215 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ANKS1AQ92625 1134 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 TIFAQ96CG3 184 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 PURBQ96QR8 312 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 IWS1Q96ST2 819 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 GAS2L1Q99501 681 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.42□□□□□ -1.543e-9■■□□□ 14
HERPUD1-213ENST00000568358 MTG1Q9BT17 334 aaPredicted RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 KATNBL1Q9H079 304 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 ZNF576Q9H609 170 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 IL23AQ9NPF7 189 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 MAP3K20Q9NYL2 800 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 TBX21Q9UL17 535 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 NEDD4P46934 1319 aa5.42□□□□□ -1.54
HERPUD1-213ENST00000568358 LAMA4Q16363 1823 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 LCTP09848 1927 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 ZBBXA8MT70 800 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 KIF28PB7ZC32 967 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 KLRF2D3W0D1 207 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 IFIT3O14879 490 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 CTAGE5O15320 804 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 HRO43593 1189 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 B4GALT4O60513 344 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 CFBP00751 764 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 GH1P01241 217 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 PFKMP08237 780 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 ACRP10323 421 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 CASTP20810 708 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 DNAJB2P25686 324 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 EPHB4P54760 987 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 CCL23P55773 120 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 PSMC6P62333 389 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 VAC14Q08AM6 782 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 BFSP2Q13515 415 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 TMEM240Q5SV17 173 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 TTC22Q5TAA0 569 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 DMRTA1Q5VZB9 504 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 NFRKBQ6P4R8 1299 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 KCNV1Q6PIU1 500 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 SLC30A10Q6XR72 485 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 SEPT14Q6ZU15 432 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 DPH6Q7L8W6 267 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 RASGRP2Q7LDG7 609 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 OTOP2Q7RTS6 562 aa5.41□□□□□ -1.54
HERPUD1-213ENST00000568358 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms