RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 USP33Q8TEY7 942 aa10.64□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.64□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 LRP2BPQ9P2M1 347 aa10.64□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 ADAMTS20P59510 1910 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 SUSD5O60279 629 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 FBLN1P23142 703 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 MBLAC2Q68D91 279 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 NETO2Q8NC67 525 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 BTN2A2Q8WVV5 523 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 RXFP1Q9HBX9 757 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 PLA2G2DQ9UNK4 145 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 PLXNC1O60486 1568 aa10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 CLTCQ00610 1675 aaKnown RBP10.63□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 ITGAVP06756 1048 aa10.62□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 SLC43A3Q8NBI5 491 aa10.62□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 RAPGEFL1Q9UHV5 662 aa10.62□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 NUDT5Q9UKK9 219 aa10.62□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 RTEL1-TNFRSF6BF6WH68 1400 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 NPATQ14207 1427 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 VPS8Q8N3P4 1428 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 MROH2AA6NES4 1674 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 ADGBQ8N7X0 1667 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 KIF3BO15066 747 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 TBX1O43435 398 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 MRM1Q6IN84 353 aaKnown RBP10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 ZNF227Q86WZ6 799 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 FRS2Q8WU20 508 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 PEX11GQ96HA9 241 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 RNF38Q9H0F5 515 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 ZCCHC4Q9H5U6 513 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 PARD6AQ9NPB6 346 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 CAMSAP2Q08AD1 1489 aa10.61□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 PTPRTO14522 1441 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 FUCA1P04066 466 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 NCAM1P13591 858 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 HOXC12P31275 282 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 LIMS1P48059 325 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 CYP4F3Q08477 520 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 WWC2Q6AWC2 1192 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 IQCEQ6IPM2 695 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 MARCH10Q8NA82 808 aaPredicted RBP10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 NPLOC4Q8TAT6 608 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 ALG3Q92685 438 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 TSPAN17Q96FV3 270 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 GMLQ99445 158 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 R3HCC1Q9Y3T6 440 aaKnown RBP10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 DHX29Q7Z478 1369 aaKnown RBP10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 CCDC141Q6ZP82 1450 aa10.6□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 PTPRKQ15262 1439 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 NCOA1Q15788 1441 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 TRIM13O60858 407 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 GJB6O95452 261 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 SLC9A5Q14940 896 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 INF2Q27J81 1249 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 VMACQ2NL98 169 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 NLGN1Q8N2Q7 840 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 DPF3Q92784 378 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 KCNC2Q96PR1 638 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 IGSF5Q9NSI5 407 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 LRRC9Q6ZRR7 1453 aa10.59□□□□□ -0.71
DNAAF4-CCPG1-202ENST00000568310 CAMSAP1Q5T5Y3 1602 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 ASGR2P07307 311 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 SNRPB2P08579 225 aaKnown RBP10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 TSPY4P0CV99 314 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 TSPY10P0CW01 314 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 ATF2P15336 505 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 LILRA6Q6PI73 481 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 PLEKHO2Q8TD55 490 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 MARCH2Q9P0N8 246 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 FAN1Q9Y2M0 1017 aa10.58□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 E9PSI1 815 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 ZBTB7AO95365 584 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 NTRK1P04629 796 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 ECI1P42126 302 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 FOXO4P98177 505 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 E4F1Q66K89 784 aaPredicted RBP10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 HNRNPLLQ8WVV9 542 aaKnown RBP10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 CCDC140Q96MF4 163 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 EPN3Q9H201 632 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 BCAS3Q9H6U6 928 aa10.57□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 SCG5P05408 212 aa10.56□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 HOXA5P20719 270 aa10.56□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 LINC01356Q8N9X3 169 aa10.56□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 BTG4Q9NY30 223 aa10.56□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 CPP00450 1065 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 PMLP29590 882 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 MC3RP41968 323 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 CAP1Q01518 475 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 ANKS3Q6ZW76 656 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 DIO2Q92813 273 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 ST7Q9NRC1 585 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 ARHGEF5Q12774 1597 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 CEP170BQ9Y4F5 1589 aaPredicted RBP10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 WASHC2CQ9Y4E1 1318 aa10.55□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 KCNJ6P48051 423 aa10.54□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 SF1Q15637 639 aaKnown RBP10.54□□□□□ -0.72
DNAAF4-CCPG1-202ENST00000568310 CCDC103Q8IW40 242 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms