RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 RUBCNQ92622 972 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 PLAGL2Q9UPG8 496 aa18.63■□□□□ 0.57
CMTM3-213ENST00000566756 DDTLA6NHG4 134 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-213ENST00000566756 LCA5LO95447 670 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 ATP1A1P05023 1023 aaKnown RBP18.62■□□□□ 0.57
CMTM3-213ENST00000566756 TECP42680 631 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 CACNB3P54284 484 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 LRRC63Q05C16 580 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 ITIH3Q06033 890 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 PSMD2Q13200 908 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 MCM6Q14566 821 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 TMEM266Q2M3C6 531 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 ASPRV1Q53RT3 343 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 SH3BP5LQ7L8J4 393 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 CCDC84Q86UT8 332 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-213ENST00000566756 EDEM3Q9BZQ6 932 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 PRLRP16471 622 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 HNRNPH2P55795 449 aaKnown RBP18.62■□□□□ 0.57
CMTM3-213ENST00000566756 TCP10Q12799 353 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 KIF5AQ12840 1032 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 GRB10Q13322 594 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 SEMA6BQ9H3T3 888 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 BLOC1S4Q9NUP1 217 aa18.62■□□□□ 0.57
CMTM3-213ENST00000566756 TTLL1O95922 423 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 FCER1AP12319 257 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 CXCL9Q07325 125 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 SEPT2Q15019 361 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 CALCRLQ16602 461 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 MAN2A1Q16706 1144 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 VWA3BQ502W6 1294 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 TATDN1Q6P1N9 297 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 USP17L2Q6R6M4 530 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 ZNF572Q7Z3I7 529 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-213ENST00000566756 TRIM58Q8NG06 486 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 JDP2Q8WYK2 163 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 LARP4BQ92615 738 aaKnown RBP18.61■□□□□ 0.57
CMTM3-213ENST00000566756 PIGSQ96S52 555 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 SIK3Q9Y2K2 1263 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 NFKBIEO00221 500 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 USO1O60763 962 aaKnown RBP18.61■□□□□ 0.57
CMTM3-213ENST00000566756 TFRCP02786 760 aaKnown RBP18.61■□□□□ 0.57
CMTM3-213ENST00000566756 SNHG28P0DPA3 235 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 AARSP49588 968 aaKnown RBP eCLIP18.61■□□□□ 0.57
CMTM3-213ENST00000566756 DLGAP5Q15398 846 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 SPA17Q15506 151 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 HSP90B2PQ58FF3 399 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 FKBP1CQ5VVH2 108 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 RIC8AQ9NPQ8 531 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 TMOD2Q9NZR1 351 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 LRWD1Q9UFC0 647 aa18.61■□□□□ 0.57
CMTM3-213ENST00000566756 PDHBP11177 359 aa18.6■□□□□ 0.57
CMTM3-213ENST00000566756 CIAPIN1Q6FI81 312 aa18.6■□□□□ 0.57
CMTM3-213ENST00000566756 GOLGA5Q8TBA6 731 aa18.6■□□□□ 0.57
CMTM3-213ENST00000566756 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
CMTM3-213ENST00000566756 CCDC42Q96M95 316 aa18.6■□□□□ 0.57
CMTM3-213ENST00000566756 PCMTD1Q96MG8 357 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-213ENST00000566756 MMS19Q96T76 1030 aa18.6■□□□□ 0.57
CMTM3-213ENST00000566756 LACRTQ9GZZ8 138 aa18.6■□□□□ 0.57
CMTM3-213ENST00000566756 PPP1R1BQ9UD71 204 aaPredicted RBP18.6■□□□□ 0.57
CMTM3-213ENST00000566756 JRKLQ9Y4A0 524 aa18.6■□□□□ 0.57
CMTM3-213ENST00000566756 SLC26A4O43511 780 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 ADCY7P51828 1080 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 EHHADHQ08426 723 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 PPP4R3AQ6IN85 833 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 NEK11Q8NG66 645 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 PNMA5Q96PV4 448 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 NDST4Q9H3R1 872 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 RCCD1A6NED2 376 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 ENC1O14682 589 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 RPS6KA5O75582 802 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 TNIP1Q15025 636 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 TMEM119Q4V9L6 283 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 RAD54LQ92698 747 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 CDK5RAP3Q96JB5 506 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 CWC15Q9P013 229 aaKnown RBP18.59■□□□□ 0.57
CMTM3-213ENST00000566756 HDAC6Q9UBN7 1215 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 BIN2Q9UBW5 565 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-213ENST00000566756 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
CMTM3-213ENST00000566756 ZBTB12Q9Y330 459 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-213ENST00000566756 MYMKA6NI61 221 aa18.58■□□□□ 0.56
CMTM3-213ENST00000566756 TXKP42681 527 aa18.58■□□□□ 0.56
CMTM3-213ENST00000566756 KLK7P49862 253 aa18.58■□□□□ 0.56
CMTM3-213ENST00000566756 SPDYE2Q495Y8 402 aa18.58■□□□□ 0.56
CMTM3-213ENST00000566756 CERKLQ49MI3 558 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-213ENST00000566756 ZBED3Q96IU2 234 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-213ENST00000566756 CPVLQ9H3G5 476 aa18.58■□□□□ 0.56
CMTM3-213ENST00000566756 ZNF70Q9UC06 446 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-213ENST00000566756 BCS1LQ9Y276 419 aa18.58■□□□□ 0.56
CMTM3-213ENST00000566756 TACC1O75410 805 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 CCDC70Q6NSX1 233 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 FAM151AQ8WW52 585 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 MKL1Q969V6 931 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 NAP1L4Q99733 375 aaKnown RBP18.57■□□□□ 0.56
CMTM3-213ENST00000566756 TRIM34Q9BYJ4 488 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 SLC39A2Q9NP94 309 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 VPS18Q9P253 973 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 HERC5Q9UII4 1024 aaKnown RBP18.57■□□□□ 0.56
CMTM3-213ENST00000566756 USP17L5A8MUK1 530 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms