RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CCSAPQ6IQ19 270 aaPredicted RBP29.81■■■□□ 2.36
NME3-209ENST00000566600 MYADML2A6NDP7 307 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 CTAGE5O15320 804 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 ZNF76P36508 570 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 LAMC2Q13753 1193 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 KRT25Q7Z3Z0 450 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 CRYGNQ8WXF5 182 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 COPS5Q92905 334 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 EMID1Q96A84 441 aaPredicted RBP29.8■■■□□ 2.36
NME3-209ENST00000566600 MXRA8Q9BRK3 442 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 SENP6Q9GZR1 1112 aaPredicted RBP29.8■■■□□ 2.36
NME3-209ENST00000566600 JADE2Q9NQC1 790 aa29.8■■■□□ 2.36
NME3-209ENST00000566600 M0R2N6 131 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 ITGB5P18084 799 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 ACLYP53396 1101 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 ARHGAP1Q07960 439 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 MTMR1Q13613 665 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 NEDD9Q14511 834 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 CEP55Q53EZ4 464 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 DHX37Q8IY37 1157 aaKnown RBP29.79■■■□□ 2.36
NME3-209ENST00000566600 GIMAP8Q8ND71 665 aaPredicted RBP29.79■■■□□ 2.36
NME3-209ENST00000566600 SENP7Q9BQF6 1050 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 GJB4Q9NTQ9 266 aa29.79■■■□□ 2.36
NME3-209ENST00000566600 BEX3Q00994 111 aa29.78■■■□□ 2.36
NME3-209ENST00000566600 NIPA1Q7RTP0 329 aa29.78■■■□□ 2.36
NME3-209ENST00000566600 POLR3EQ9NVU0 708 aa29.78■■■□□ 2.36
NME3-209ENST00000566600 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.78■■■□□ 2.36
NME3-209ENST00000566600 A6NJR5 290 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 KPNA6O60684 536 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 ASGR1P07306 291 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 UBA1P22314 1058 aaKnown RBP29.77■■■□□ 2.36
NME3-209ENST00000566600 PTGS1P23219 599 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 KRT2P35908 639 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 USP11P51784 963 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 CELF3Q5SZQ8 465 aaKnown RBP29.77■■■□□ 2.36
NME3-209ENST00000566600 KRT40Q6A162 431 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 C8orf76Q96K31 380 aa29.77■■■□□ 2.36
NME3-209ENST00000566600 CCDC194A0A1B0GVG4 234 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 A0A1W2PQ45 241 aaPredicted RBP29.76■■■□□ 2.35
NME3-209ENST00000566600 A0A1W2PQY0 241 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 CABYRO75952 493 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 GGPS1O95749 300 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 MMP1P03956 469 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 IRX5P78411 483 aaPredicted RBP29.76■■■□□ 2.35
NME3-209ENST00000566600 SP2Q02086 613 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 SEMA3FQ13275 785 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 NONOQ15233 471 aaKnown RBP eCLIP29.76■■■□□ 2.35
NME3-209ENST00000566600 SAFBQ15424 915 aaKnown RBP eCLIP29.76■■■□□ 2.35
NME3-209ENST00000566600 MYSM1Q5VVJ2 828 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 FERMT2Q96AC1 680 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 GLT1D1Q96MS3 346 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 MLXIPQ9HAP2 919 aa29.76■■■□□ 2.35
NME3-209ENST00000566600 MEIS1O00470 390 aa29.75■■■□□ 2.35
NME3-209ENST00000566600 TBCKQ8TEA7 893 aa29.75■■■□□ 2.35
NME3-209ENST00000566600 CIITAP33076 1130 aa29.74■■■□□ 2.35
NME3-209ENST00000566600 PPTC7Q8NI37 304 aa29.74■■■□□ 2.35
NME3-209ENST00000566600 AFG1LQ8WV93 481 aa29.74■■■□□ 2.35
NME3-209ENST00000566600 SNX21Q969T3 373 aa29.74■■■□□ 2.35
NME3-209ENST00000566600 KCNH7Q9NS40 1196 aa29.74■■■□□ 2.35
NME3-209ENST00000566600 ELP1O95163 1332 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 MYH7BA7E2Y1 1941 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 FOSBP53539 338 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 SETQ01105 290 aaPredicted RBP29.73■■■□□ 2.35
NME3-209ENST00000566600 METTL7BQ6UX53 244 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 CYP2W1Q8TAV3 490 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 OXER1Q8TDS5 423 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 SPATA33Q96N06 139 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 STARD7Q9NQZ5 370 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 SMC3Q9UQE7 1217 aa29.73■■■□□ 2.35
NME3-209ENST00000566600 MMP3P08254 477 aa29.72■■■□□ 2.35
NME3-209ENST00000566600 MYL3P08590 195 aa29.72■■■□□ 2.35
NME3-209ENST00000566600 CUL4AQ13619 759 aa29.72■■■□□ 2.35
NME3-209ENST00000566600 SLC39A5Q6ZMH5 540 aa29.72■■■□□ 2.35
NME3-209ENST00000566600 PLA2G4DQ86XP0 818 aa29.72■■■□□ 2.35
NME3-209ENST00000566600 DIS3L2Q8IYB7 885 aaKnown RBP29.72■■■□□ 2.35
NME3-209ENST00000566600 FBXO18Q8NFZ0 1043 aa29.72■■■□□ 2.35
NME3-209ENST00000566600 VTI1AQ96AJ9 217 aa29.72■■■□□ 2.35
NME3-209ENST00000566600 FAM86B1E9PN63 330 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 K7ELQ4 463 aaPredicted RBP29.71■■■□□ 2.35
NME3-209ENST00000566600 FAM86B2P0C5J1 330 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 KCNA2P16389 499 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 DGKDQ16760 1214 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 C1orf53Q5VUE5 145 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 CXCL17Q6UXB2 119 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 CYFIP1Q7L576 1253 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 DPF3Q92784 378 aa29.71■■■□□ 2.35
NME3-209ENST00000566600 IGLV3-22A0A075B6J6 115 aa29.7■■■□□ 2.35
NME3-209ENST00000566600 NOP56O00567 594 aaKnown RBP29.7■■■□□ 2.35
NME3-209ENST00000566600 PPFIA4O75335 1185 aa29.7■■■□□ 2.35
NME3-209ENST00000566600 ATN1P54259 1190 aaPredicted RBP29.7■■■□□ 2.35
NME3-209ENST00000566600 PURAQ00577 322 aaKnown RBP29.7■■■□□ 2.35
NME3-209ENST00000566600 MTG1Q9BT17 334 aaPredicted RBP29.7■■■□□ 2.35
NME3-209ENST00000566600 SEZ6LQ9BYH1 1024 aa29.7■■■□□ 2.35
NME3-209ENST00000566600 BTBD18B2RXH4 712 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 ATP9AO75110 1047 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 ARP10275 920 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 GJB2P29033 226 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 SNX17Q15036 470 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 INF2Q27J81 1249 aa29.69■■■□□ 2.34
NME3-209ENST00000566600 MOXD1Q6UVY6 613 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms