RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 TBX3O15119 743 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 MSH4O15457 936 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 NEMFO60524 1076 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 ZNF76P36508 570 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 SETQ01105 290 aaPredicted RBP17.56■□□□□ 0.4
SNHG20-204ENST00000566583 ARHGEF6Q15052 776 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 TAPT1Q6NXT6 567 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 LEO1Q8WVC0 666 aaPredicted RBP17.56■□□□□ 0.4
SNHG20-204ENST00000566583 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
SNHG20-204ENST00000566583 VTA1Q9NP79 307 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 KCNH7Q9NS40 1196 aa17.56■□□□□ 0.4
SNHG20-204ENST00000566583 LAD1O00515 517 aa17.55■□□□□ 0.4
SNHG20-204ENST00000566583 MAFGO15525 162 aa17.55■□□□□ 0.4
SNHG20-204ENST00000566583 PRPHP41219 470 aa17.55■□□□□ 0.4
SNHG20-204ENST00000566583 CEBPZQ03701 1054 aaKnown RBP17.55■□□□□ 0.4
SNHG20-204ENST00000566583 IL17AQ16552 155 aa17.55■□□□□ 0.4
SNHG20-204ENST00000566583 ARL6IP4Q66PJ3 421 aaKnown RBP17.55■□□□□ 0.4
SNHG20-204ENST00000566583 CCDC62Q6P9F0 684 aa17.55■□□□□ 0.4
SNHG20-204ENST00000566583 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
SNHG20-204ENST00000566583 PXYLP1Q8TE99 480 aa17.55■□□□□ 0.4
SNHG20-204ENST00000566583 ABHD16BQ9H3Z7 469 aa17.55■□□□□ 0.4
SNHG20-204ENST00000566583 AGO4Q9HCK5 861 aaKnown RBP17.55■□□□□ 0.4
SNHG20-204ENST00000566583 MYH9P35579 1960 aaKnown RBP17.55■□□□□ 0.4
SNHG20-204ENST00000566583 DHX15O43143 795 aaKnown RBP17.54■□□□□ 0.4
SNHG20-204ENST00000566583 FIBPO43427 364 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 ATP9AO75110 1047 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 PPP6R2O75170 966 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 OR52Z1P0C646 297 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 ZNF865P0CJ78 1059 aaPredicted RBP17.54■□□□□ 0.4
SNHG20-204ENST00000566583 KCNA2P16389 499 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 SP2Q02086 613 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 MTMR1Q13613 665 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 B3GNT9Q6UX72 402 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 NLRX1Q86UT6 975 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 FBXO16Q8IX29 292 aaPredicted RBP17.54■□□□□ 0.4
SNHG20-204ENST00000566583 TMEM87AQ8NBN3 555 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 FAM20AQ96MK3 541 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
SNHG20-204ENST00000566583 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 NRBP1Q9UHY1 535 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 FBXO2Q9UK22 296 aaPredicted RBP17.54■□□□□ 0.4
SNHG20-204ENST00000566583 CEP131Q9UPN4 1083 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 ELP1O95163 1332 aa17.54■□□□□ 0.4
SNHG20-204ENST00000566583 SPTLC2O15270 562 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 PSMD10O75832 226 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 ARIH2O95376 493 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 TGFB3P10600 412 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 CYP2C19P33261 490 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
SNHG20-204ENST00000566583 SPIRE1Q08AE8 756 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 ITGB3BPQ13352 177 aaPredicted RBP17.53■□□□□ 0.4
SNHG20-204ENST00000566583 ACVR2BQ13705 512 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 STK38Q15208 465 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 CALCRLQ16602 461 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 GNPTABQ3T906 1256 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 AXDND1Q5T1B0 1012 aaPredicted RBP17.53■□□□□ 0.4
SNHG20-204ENST00000566583 EEPD1Q7L9B9 569 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 TRIM17Q9Y577 477 aa17.53■□□□□ 0.4
SNHG20-204ENST00000566583 SRPRBQ9Y5M8 271 aaKnown RBP17.53■□□□□ 0.4
SNHG20-204ENST00000566583 ADCY3O60266 1144 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 CYBAP13498 195 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 LBX1P52954 281 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 GRIN1Q05586 938 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 SEPT14Q6ZU15 432 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 TRPV1Q8NER1 839 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 KCNG4Q8TDN1 519 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 GJA10Q969M2 543 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 CDHR1Q96JP9 859 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 SPATA32Q96LK8 384 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 RIT2Q99578 217 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 SENP7Q9BQF6 1050 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 DDX41Q9UJV9 622 aaKnown RBP17.52■□□□□ 0.4
SNHG20-204ENST00000566583 VAV3Q9UKW4 847 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 PTCH2Q9Y6C5 1203 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 NFASCO94856 1347 aa17.52■□□□□ 0.4
SNHG20-204ENST00000566583 IPO5O00410 1097 aaKnown RBP17.51■□□□□ 0.39
SNHG20-204ENST00000566583 ELNP15502 786 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 NCLP19338 710 aaKnown RBP17.51■□□□□ 0.39
SNHG20-204ENST00000566583 MARCKSP29966 332 aaPredicted RBP17.51■□□□□ 0.39
SNHG20-204ENST00000566583 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNHG20-204ENST00000566583 TRIM32Q13049 653 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 PRAMEF19Q5SWL8 479 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 TMEM63BQ5T3F8 832 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 KCNV1Q6PIU1 500 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 SLFN12Q8IYM2 578 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 SCFD2Q8WU76 684 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 ZNF577Q9BSK1 485 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 BCAS3Q9H6U6 928 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 PTPN22Q9Y2R2 807 aa17.51■□□□□ 0.39
SNHG20-204ENST00000566583 POTEFA5A3E0 1075 aa17.5■□□□□ 0.39
SNHG20-204ENST00000566583 ADCY6O43306 1168 aa17.5■□□□□ 0.39
SNHG20-204ENST00000566583 HMGCRP04035 888 aa17.5■□□□□ 0.39
SNHG20-204ENST00000566583 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
SNHG20-204ENST00000566583 CACNB2Q08289 660 aaPredicted RBP17.5■□□□□ 0.39
SNHG20-204ENST00000566583 MFSD14CQ5VZR4 134 aa17.5■□□□□ 0.39
SNHG20-204ENST00000566583 IGSF22Q8N9C0 903 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms