RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 MYCNP04198 464 aaPredicted RBP24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 CYP3A4P08684 503 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 ITGB5P18084 799 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 ACLYP53396 1101 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 ARHGAP1Q07960 439 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 KCNA10Q16322 511 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 LY6KQ17RY6 165 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 A6NJR5 290 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 ZEB2O60315 1214 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 UBA1P22314 1058 aaKnown RBP24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 PTGS1P23219 599 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 SEMA3FQ13275 785 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 BRDTQ58F21 947 aaPredicted RBP24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 RASGRP4Q8TDF6 673 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 SENP7Q9BQF6 1050 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 RTEL1Q9NZ71 1219 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 KCNJ14Q9UNX9 436 aa24.04■■□□□ 1.44
SHCBP1-205ENST00000566016 A0A1W2PQ45 241 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 A0A1W2PQY0 241 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 DTNBO60941 627 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 ASGR1P07306 291 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 IRX5P78411 483 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 MTMR1Q13613 665 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 CEP55Q53EZ4 464 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 NIPA1Q7RTP0 329 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 COPS5Q92905 334 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 ZFP91Q96JP5 570 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 SENP6Q9GZR1 1112 aaPredicted RBP24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 JADE2Q9NQC1 790 aa24.03■■□□□ 1.44
SHCBP1-205ENST00000566016 ELP1O95163 1332 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 CABYRO75952 493 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 BEX3Q00994 111 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 LAMC2Q13753 1193 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 NEDD9Q14511 834 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 SNX17Q15036 470 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 CELF3Q5SZQ8 465 aaKnown RBP24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 C1orf53Q5VUE5 145 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 MXRA8Q9BRK3 442 aa24.02■■□□□ 1.44
SHCBP1-205ENST00000566016 SP2Q02086 613 aa24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 TRIM29Q14134 588 aa24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 MYSM1Q5VVJ2 828 aa24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 KRT25Q7Z3Z0 450 aa24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 GIMAP8Q8ND71 665 aaPredicted RBP24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 PPTC7Q8NI37 304 aa24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 GLT1D1Q96MS3 346 aa24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 GJB4Q9NTQ9 266 aa24.01■■□□□ 1.43
SHCBP1-205ENST00000566016 MEIS1O00470 390 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 KPNA6O60684 536 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 GGPS1O95749 300 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 MMP1P03956 469 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 CIITAP33076 1130 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 USP11P51784 963 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 METTL7BQ6UX53 244 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 DHX37Q8IY37 1157 aaKnown RBP24■■□□□ 1.43
SHCBP1-205ENST00000566016 BRMS1Q9HCU9 246 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 POLR3EQ9NVU0 708 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 HOXD8P13378 290 aaPredicted RBP24■■□□□ 1.43
SHCBP1-205ENST00000566016 KIF3AQ9Y496 699 aa24■■□□□ 1.43
SHCBP1-205ENST00000566016 FAM86B1E9PN63 330 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 MMP3P08254 477 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 FAM86B2P0C5J1 330 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 KCNA2P16389 499 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 PURAQ00577 322 aaKnown RBP23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 SETQ01105 290 aaPredicted RBP23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 NONOQ15233 471 aaKnown RBP eCLIP23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 KRT40Q6A162 431 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 FAM184AQ8NB25 1140 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 AFG1LQ8WV93 481 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 FERMT2Q96AC1 680 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 STARD7Q9NQZ5 370 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 KCNH7Q9NS40 1196 aa23.99■■□□□ 1.43
SHCBP1-205ENST00000566016 IGLV3-22A0A075B6J6 115 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 KRT2P35908 639 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 ZNF76P36508 570 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 CXCL17Q6UXB2 119 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 SLC39A5Q6ZMH5 540 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 CYP2W1Q8TAV3 490 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 TBCKQ8TEA7 893 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 C8orf76Q96K31 380 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 SEZ6LQ9BYH1 1024 aa23.98■■□□□ 1.43
SHCBP1-205ENST00000566016 CUL4AQ13619 759 aa23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 DGKDQ16760 1214 aa23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 LRRC26Q2I0M4 334 aa23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 MOXD1Q6UVY6 613 aa23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 TNFRSF25Q93038 417 aa23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 SPATA33Q96N06 139 aa23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 MLXIPQ9HAP2 919 aa23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.97■■□□□ 1.43
SHCBP1-205ENST00000566016 CCDC194A0A1B0GVG4 234 aa23.96■■□□□ 1.43
SHCBP1-205ENST00000566016 HSDL1Q3SXM5 330 aa23.96■■□□□ 1.43
SHCBP1-205ENST00000566016 FBXO18Q8NFZ0 1043 aa23.96■■□□□ 1.43
SHCBP1-205ENST00000566016 OXER1Q8TDS5 423 aa23.96■■□□□ 1.43
SHCBP1-205ENST00000566016 SNX21Q969T3 373 aa23.96■■□□□ 1.43
SHCBP1-205ENST00000566016 NFASCO94856 1347 aa23.96■■□□□ 1.43
SHCBP1-205ENST00000566016 A0A0U1RQG5 324 aaPredicted RBP23.95■■□□□ 1.42
SHCBP1-205ENST00000566016 EDIL3O43854 480 aa23.95■■□□□ 1.42
SHCBP1-205ENST00000566016 ATP9AO75110 1047 aa23.95■■□□□ 1.42
SHCBP1-205ENST00000566016 PPFIA4O75335 1185 aa23.95■■□□□ 1.42
SHCBP1-205ENST00000566016 CYFIP1Q7L576 1253 aa23.95■■□□□ 1.42
SHCBP1-205ENST00000566016 DIS3L2Q8IYB7 885 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms