RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ALG1Q9BT22 464 aa21.4■■□□□ 1.02
CLN6-204ENST00000564752 BAIAP3O94812 1187 aa21.39■■□□□ 1.01
CLN6-204ENST00000564752 CA3P07451 260 aa21.39■■□□□ 1.01
CLN6-204ENST00000564752 SP2Q02086 613 aa21.39■■□□□ 1.01
CLN6-204ENST00000564752 CCDC85BQ15834 202 aaPredicted RBP21.39■■□□□ 1.01
CLN6-204ENST00000564752 KIAA0753Q2KHM9 967 aa21.39■■□□□ 1.01
CLN6-204ENST00000564752 CATIPQ7Z7H3 387 aa21.39■■□□□ 1.01
CLN6-204ENST00000564752 FCHSD1Q86WN1 690 aa21.39■■□□□ 1.01
CLN6-204ENST00000564752 SLC27A2O14975 620 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 CDC45O75419 566 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 PARNO95453 639 aaKnown RBP21.38■■□□□ 1.01
CLN6-204ENST00000564752 GGPS1O95749 300 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 ZNF286BP0CG31 522 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 CCND2P30279 289 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 HSDL1Q3SXM5 330 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 LRRC8DQ7L1W4 858 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 HERC6Q8IVU3 1022 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 ATXN2LQ8WWM7 1075 aaKnown RBP21.38■■□□□ 1.01
CLN6-204ENST00000564752 SPATA33Q96N06 139 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 SCN5AQ14524 2016 aa21.38■■□□□ 1.01
CLN6-204ENST00000564752 MUC3AQ02505 3323 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 KIF28PB7ZC32 967 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 CXCL10P02778 98 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 CKBP12277 381 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 UBA1P22314 1058 aaKnown RBP21.37■■□□□ 1.01
CLN6-204ENST00000564752 PTK7Q13308 1070 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 CREB3L3Q68CJ9 461 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 GPKOWQ92917 476 aaPredicted RBP eCLIP21.37■■□□□ 1.01
CLN6-204ENST00000564752 ZFP91Q96JP5 570 aaPredicted RBP21.37■■□□□ 1.01
CLN6-204ENST00000564752 MAP3K14Q99558 947 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 KIAA1217Q5T5P2 1943 aa21.37■■□□□ 1.01
CLN6-204ENST00000564752 SORBS3O60504 671 aa21.36■■□□□ 1.01
CLN6-204ENST00000564752 TRIM71Q2Q1W2 868 aaKnown RBP21.36■■□□□ 1.01
CLN6-204ENST00000564752 C16orf70Q9BSU1 422 aa21.36■■□□□ 1.01
CLN6-204ENST00000564752 MLXIPQ9HAP2 919 aa21.36■■□□□ 1.01
CLN6-204ENST00000564752 LY9Q9HBG7 655 aa21.36■■□□□ 1.01
CLN6-204ENST00000564752 THEGQ9P2T0 379 aa21.36■■□□□ 1.01
CLN6-204ENST00000564752 PRC1O43663 620 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 NBNO60934 754 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 SMARCA1P28370 1054 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 MCM5P33992 734 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 KCNJ6P48051 423 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 MRPS9P82933 396 aaKnown RBP21.35■■□□□ 1.01
CLN6-204ENST00000564752 ZNF200P98182 395 aaPredicted RBP21.35■■□□□ 1.01
CLN6-204ENST00000564752 NECTIN1Q15223 517 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 RNF20Q5VTR2 975 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 TRAF7Q6Q0C0 670 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 PIBF1Q8WXW3 757 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 ASB2Q96Q27 587 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 MTA3Q9BTC8 594 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 SPZ1Q9BXG8 430 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 BAZ2BQ9UIF8 2168 aaKnown RBP21.35■■□□□ 1.01
CLN6-204ENST00000564752 TET1Q8NFU7 2136 aa21.35■■□□□ 1.01
CLN6-204ENST00000564752 FRMPD4Q14CM0 1322 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 RFXAPO00287 272 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 STAM2O75886 525 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 DDAH1O94760 285 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 ARHGEF15O94989 841 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 POU3F3P20264 500 aaPredicted RBP21.34■■□□□ 1.01
CLN6-204ENST00000564752 ICAM3P32942 547 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 WDR5P61964 334 aaKnown RBP21.34■■□□□ 1.01
CLN6-204ENST00000564752 TAP1Q03518 808 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 HIC1Q14526 733 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 CNKSR3Q6P9H4 555 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 ZNF654Q8IZM8 581 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 WNT8BQ93098 351 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 INPP4AQ96PE3 977 aaPredicted RBP21.34■■□□□ 1.01
CLN6-204ENST00000564752 BCAS3Q9H6U6 928 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 CERS4Q9HA82 394 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 TRANK1O15050 2925 aa21.34■■□□□ 1.01
CLN6-204ENST00000564752 TNFRSF10AO00220 468 aa21.33■■□□□ 1.01
CLN6-204ENST00000564752 KIF5BP33176 963 aa21.33■■□□□ 1.01
CLN6-204ENST00000564752 MRPS5P82675 430 aaKnown RBP21.33■■□□□ 1.01
CLN6-204ENST00000564752 GNPTABQ3T906 1256 aa21.33■■□□□ 1.01
CLN6-204ENST00000564752 ZNF618Q5T7W0 954 aa21.33■■□□□ 1.01
CLN6-204ENST00000564752 NFXL1Q6ZNB6 911 aa21.33■■□□□ 1.01
CLN6-204ENST00000564752 CTCFLQ8NI51 663 aaPredicted RBP21.33■■□□□ 1.01
CLN6-204ENST00000564752 RRP36Q96EU6 259 aaKnown RBP21.33■■□□□ 1.01
CLN6-204ENST00000564752 TMEM87BQ96K49 555 aa21.33■■□□□ 1.01
CLN6-204ENST00000564752 MYL10Q9BUA6 226 aa21.33■■□□□ 1.01
CLN6-204ENST00000564752 EPOPA6NHQ4 379 aa21.32■■□□□ 1
CLN6-204ENST00000564752 SPATA31C2B4DYI2 1134 aa21.32■■□□□ 1
CLN6-204ENST00000564752 SH2B2O14492 632 aaPredicted RBP21.32■■□□□ 1
CLN6-204ENST00000564752 TLL1O43897 1013 aa21.32■■□□□ 1
CLN6-204ENST00000564752 TCTN1Q2MV58 587 aa21.32■■□□□ 1
CLN6-204ENST00000564752 TMTC2Q8N394 836 aa21.32■■□□□ 1
CLN6-204ENST00000564752 LZTS2Q9BRK4 669 aa21.32■■□□□ 1
CLN6-204ENST00000564752 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
CLN6-204ENST00000564752 MTCH2Q9Y6C9 303 aa21.32■■□□□ 1
CLN6-204ENST00000564752 XIRP2A4UGR9 3374 aa21.32■■□□□ 1
CLN6-204ENST00000564752 TRIP12Q14669 1992 aaPredicted RBP21.32■■□□□ 1
CLN6-204ENST00000564752 TANC1Q9C0D5 1861 aa21.31■■□□□ 1
CLN6-204ENST00000564752 ABHD14A-ACY1A0A1B0GW23 586 aa21.31■■□□□ 1
CLN6-204ENST00000564752 CCDC69A6NI79 296 aa21.31■■□□□ 1
CLN6-204ENST00000564752 H3BRB1 525 aa21.31■■□□□ 1
CLN6-204ENST00000564752 LGALS2P05162 132 aa21.31■■□□□ 1
CLN6-204ENST00000564752 SEMA3FQ13275 785 aa21.31■■□□□ 1
CLN6-204ENST00000564752 NEDD9Q14511 834 aa21.31■■□□□ 1
CLN6-204ENST00000564752 MBTPS1Q14703 1052 aa21.31■■□□□ 1
CLN6-204ENST00000564752 USP17L6PQ6QN14 398 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms