RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 HDAC6Q9UBN7 1215 aa19.36■□□□□ 0.69
CCNF-203ENST00000564236 MYH6P13533 1939 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 ZBBXA8MT70 800 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 MYCLP12524 364 aaPredicted RBP19.35■□□□□ 0.69
CCNF-203ENST00000564236 KIF5BP33176 963 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 LIFRP42702 1097 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 RABGGTBP53611 331 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 PTK7Q13308 1070 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 NECTIN1Q15223 517 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 KIAA0753Q2KHM9 967 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 C7orf31Q8N865 590 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 C16orf70Q9BSU1 422 aa19.35■□□□□ 0.69
CCNF-203ENST00000564236 MUC3AQ02505 3323 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 SH2B2O14492 632 aaPredicted RBP19.34■□□□□ 0.69
CCNF-203ENST00000564236 GGPS1O95749 300 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 POU3F3P20264 500 aaPredicted RBP19.34■□□□□ 0.69
CCNF-203ENST00000564236 MCM5P33992 734 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 GNAQP50148 359 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 MRPS9P82933 396 aaKnown RBP19.34■□□□□ 0.69
CCNF-203ENST00000564236 TRIM71Q2Q1W2 868 aaKnown RBP19.34■□□□□ 0.69
CCNF-203ENST00000564236 PPP2R2DQ66LE6 453 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 XRRA1Q6P2D8 792 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 TRAF7Q6Q0C0 670 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 CASC1Q6TDU7 716 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 LRRC8DQ7L1W4 858 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 CTCFLQ8NI51 663 aaPredicted RBP19.34■□□□□ 0.69
CCNF-203ENST00000564236 SPATA33Q96N06 139 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 ESYT1Q9BSJ8 1104 aa19.34■□□□□ 0.69
CCNF-203ENST00000564236 SPATA31C2B4DYI2 1134 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 SLC27A2O14975 620 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 PRC1O43663 620 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 ZNF286BP0CG31 522 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 CKBP12277 381 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 MYOGP15173 224 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 GNPTABQ3T906 1256 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 FCHSD1Q86WN1 690 aa19.33■□□□□ 0.68
CCNF-203ENST00000564236 SYMPKQ92797 1274 aaKnown RBP19.33■□□□□ 0.68
CCNF-203ENST00000564236 MEIS2O14770 477 aa19.32■□□□□ 0.68
CCNF-203ENST00000564236 BMP2KLQ5H9B9 411 aa19.32■□□□□ 0.68
CCNF-203ENST00000564236 METTL7BQ6UX53 244 aa19.32■□□□□ 0.68
CCNF-203ENST00000564236 HERC6Q8IVU3 1022 aa19.32■□□□□ 0.68
CCNF-203ENST00000564236 GPKOWQ92917 476 aaPredicted RBP eCLIP19.32■□□□□ 0.68
CCNF-203ENST00000564236 RRP36Q96EU6 259 aaKnown RBP19.32■□□□□ 0.68
CCNF-203ENST00000564236 SCN5AQ14524 2016 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 FIBPO43427 364 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 NBNO60934 754 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 CA3P07451 260 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 CALM1P0DP23 149 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 CALM2P0DP24 149 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 CALM3P0DP25 149 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 SEMA3FQ13275 785 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 COL9A3Q14050 684 aaPredicted RBP19.31■□□□□ 0.68
CCNF-203ENST00000564236 NEDD9Q14511 834 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 HIC1Q14526 733 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 TJAP1Q5JTD0 557 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 PCNX4Q63HM2 1172 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 CNKSR3Q6P9H4 555 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 SERINC5Q86VE9 423 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 SGMS1Q86VZ5 419 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 SRBD1Q8N5C6 995 aaKnown RBP19.31■□□□□ 0.68
CCNF-203ENST00000564236 ATXN2LQ8WWM7 1075 aaKnown RBP19.31■□□□□ 0.68
CCNF-203ENST00000564236 SENP7Q9BQF6 1050 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 ALG1Q9BT22 464 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 MYL10Q9BUA6 226 aa19.31■□□□□ 0.68
CCNF-203ENST00000564236 FTOQ9C0B1 505 aaKnown RBP eCLIP19.31■□□□□ 0.68
CCNF-203ENST00000564236 EFCAB14O75071 495 aa19.3■□□□□ 0.68
CCNF-203ENST00000564236 CHMP4BP1P59074 171 aa19.3■□□□□ 0.68
CCNF-203ENST00000564236 WDR5P61964 334 aaKnown RBP19.3■□□□□ 0.68
CCNF-203ENST00000564236 CREB3L3Q68CJ9 461 aa19.3■□□□□ 0.68
CCNF-203ENST00000564236 WNT8BQ93098 351 aa19.3■□□□□ 0.68
CCNF-203ENST00000564236 USP26Q9BXU7 913 aa19.3■□□□□ 0.68
CCNF-203ENST00000564236 MLXIPQ9HAP2 919 aa19.3■□□□□ 0.68
CCNF-203ENST00000564236 GBF1Q92538 1859 aa19.3■□□□□ 0.68
CCNF-203ENST00000564236 ABHD14A-ACY1A0A1B0GW23 586 aa19.29■□□□□ 0.68
CCNF-203ENST00000564236 H3BRB1 525 aa19.29■□□□□ 0.68
CCNF-203ENST00000564236 PLEKHA8P1O95397 391 aa19.29■□□□□ 0.68
CCNF-203ENST00000564236 LGALS2P05162 132 aa19.29■□□□□ 0.68
CCNF-203ENST00000564236 MKRN4PQ13434 485 aaPredicted RBP19.29■□□□□ 0.68
CCNF-203ENST00000564236 TEX2Q8IWB9 1127 aa19.29■□□□□ 0.68
CCNF-203ENST00000564236 TUT1Q9H6E5 874 aaKnown RBP19.29■□□□□ 0.68
CCNF-203ENST00000564236 SEC63Q9UGP8 760 aaKnown RBP19.29■□□□□ 0.68
CCNF-203ENST00000564236 CCDC69A6NI79 296 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 KIF28PB7ZC32 967 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 CAND2O75155 1236 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 ZNF200P98182 395 aaPredicted RBP19.28■□□□□ 0.68
CCNF-203ENST00000564236 TAP1Q03518 808 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 MBTPS1Q14703 1052 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 ZNF618Q5T7W0 954 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 USP17L6PQ6QN14 398 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 CUL5Q93034 780 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 GPR20Q99678 358 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 BCAS3Q9H6U6 928 aa19.28■□□□□ 0.68
CCNF-203ENST00000564236 EMSYQ7Z589 1322 aa19.27■□□□□ 0.68
CCNF-203ENST00000564236 IGFBP4P22692 258 aa19.27■□□□□ 0.68
CCNF-203ENST00000564236 KCNJ6P48051 423 aa19.27■□□□□ 0.68
CCNF-203ENST00000564236 TSGA10IPQ3SY00 556 aa19.27■□□□□ 0.68
CCNF-203ENST00000564236 TMTC3Q6ZXV5 915 aa19.27■□□□□ 0.68
CCNF-203ENST00000564236 CENPQQ7L2Z9 268 aaPredicted RBP19.27■□□□□ 0.68
CCNF-203ENST00000564236 FANCBQ8NB91 859 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms