RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 AFG1LQ8WV93 481 aa19.55■□□□□ 0.72
SPSB3-202ENST00000563668 BCAS3Q9H6U6 928 aa19.55■□□□□ 0.72
SPSB3-202ENST00000563668 TMEM39AQ9NV64 488 aa19.55■□□□□ 0.72
SPSB3-202ENST00000563668 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
SPSB3-202ENST00000563668 A6NJR5 290 aa19.54■□□□□ 0.72
SPSB3-202ENST00000563668 KIAA0355O15063 1070 aa19.54■□□□□ 0.72
SPSB3-202ENST00000563668 NKRFO15226 690 aaKnown RBP eCLIP19.54■□□□□ 0.72
SPSB3-202ENST00000563668 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
SPSB3-202ENST00000563668 UBE2SQ16763 222 aa19.54■□□□□ 0.72
SPSB3-202ENST00000563668 KLHL40Q2TBA0 621 aa19.54■□□□□ 0.72
SPSB3-202ENST00000563668 FBXL16Q8N461 479 aa19.54■□□□□ 0.72
SPSB3-202ENST00000563668 LBHD1Q9BQE6 289 aaPredicted RBP19.54■□□□□ 0.72
SPSB3-202ENST00000563668 GZF1Q9H116 711 aaPredicted RBP19.54■□□□□ 0.72
SPSB3-202ENST00000563668 FRMPD4Q14CM0 1322 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 DCDC2CA8MYV0 355 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 PIK3CDO00329 1044 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 ZEB2O60315 1214 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 CPT1AP50416 773 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 FOXD4L5Q5VV16 416 aaPredicted RBP19.53■□□□□ 0.72
SPSB3-202ENST00000563668 NECAB1Q8N987 351 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 SMARCC2Q8TAQ2 1214 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 FOXD4L4Q8WXT5 416 aaPredicted RBP19.53■□□□□ 0.72
SPSB3-202ENST00000563668 PSTPIP2Q9H939 334 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 RTEL1Q9NZ71 1219 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 TBX21Q9UL17 535 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 MRVI1Q9Y6F6 885 aa19.53■□□□□ 0.72
SPSB3-202ENST00000563668 CABYRO75952 493 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 GH1P01241 217 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 CD4P01730 458 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 SYT1P21579 422 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 GJB2P29033 226 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 CCND2P30279 289 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 METAP2P50579 478 aaKnown RBP eCLIP19.52■□□□□ 0.72
SPSB3-202ENST00000563668 EPHB4P54760 987 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 TRPV6Q9H1D0 765 aa19.52■□□□□ 0.72
SPSB3-202ENST00000563668 ADAMTS3O15072 1205 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 STX6O43752 255 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 ZSCAN22P10073 491 aaPredicted RBP19.51■□□□□ 0.71
SPSB3-202ENST00000563668 TDHQ8IZJ6 230 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 NCOA5Q9HCD5 579 aaKnown RBP19.51■□□□□ 0.71
SPSB3-202ENST00000563668 A0A1W2PPC1 479 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 FSD2A1L4K1 749 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 STXBP3O00186 592 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 B4GALT4O60513 344 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 SLC34A2O95436 690 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 MMP3P08254 477 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 PDIA3P30101 505 aaKnown RBP19.51■□□□□ 0.71
SPSB3-202ENST00000563668 RCAN1P53805 252 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 SEMA3FQ13275 785 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 C9orf50Q5SZB4 431 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 CUL5Q93034 780 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 LRCH3Q96II8 777 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 MTG1Q9BT17 334 aaPredicted RBP19.51■□□□□ 0.71
SPSB3-202ENST00000563668 POLR3EQ9NVU0 708 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 TELO2Q9Y4R8 837 aa19.51■□□□□ 0.71
SPSB3-202ENST00000563668 RAG1P15918 1043 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 EVCP57679 992 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 CCT2P78371 535 aaKnown RBP19.5■□□□□ 0.71
SPSB3-202ENST00000563668 NTRK3Q16288 839 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 NBPF20Q3BBV1 942 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 MYSM1Q5VVJ2 828 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 KAT2BQ92831 832 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 PHKBQ93100 1093 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 CHAMP1Q96JM3 812 aa19.5■□□□□ 0.71
SPSB3-202ENST00000563668 TRMT13Q9NUP7 481 aaKnown RBP19.5■□□□□ 0.71
SPSB3-202ENST00000563668 UMODL1Q5DID0 1318 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 MROH7Q68CQ1 1323 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 MYH7BA7E2Y1 1941 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 NID2Q14112 1375 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 RBAK-RBAKDNI3L0D1 243 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 PRPF40AO75400 957 aaKnown RBP19.49■□□□□ 0.71
SPSB3-202ENST00000563668 UBA1P22314 1058 aaKnown RBP19.49■□□□□ 0.71
SPSB3-202ENST00000563668 SHHQ15465 462 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 PKN1Q16512 942 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 CELF3Q5SZQ8 465 aaKnown RBP19.49■□□□□ 0.71
SPSB3-202ENST00000563668 DHX37Q8IY37 1157 aaKnown RBP19.49■□□□□ 0.71
SPSB3-202ENST00000563668 INPP4AQ96PE3 977 aaPredicted RBP19.49■□□□□ 0.71
SPSB3-202ENST00000563668 PPP1R12CQ9BZL4 782 aa19.49■□□□□ 0.71
SPSB3-202ENST00000563668 SCN10AQ9Y5Y9 1956 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 GGPS1O95749 300 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 TIMP1P01033 207 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 PDIA4P13667 645 aaKnown RBP19.48■□□□□ 0.71
SPSB3-202ENST00000563668 NAPAP54920 295 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 CHMP4BP1P59074 171 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 HSDL1Q3SXM5 330 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 PCNX4Q63HM2 1172 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 GTF3C6Q969F1 213 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 EMID1Q96A84 441 aaPredicted RBP19.48■□□□□ 0.71
SPSB3-202ENST00000563668 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 BARHL2Q9NY43 387 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 PCDHA6Q9UN73 950 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 MTMR6Q9Y217 621 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 PCDHA8Q9Y5H6 950 aa19.48■□□□□ 0.71
SPSB3-202ENST00000563668 SPATA31C2B4DYI2 1134 aa19.47■□□□□ 0.71
SPSB3-202ENST00000563668 CYP2C18P33260 490 aa19.47■□□□□ 0.71
SPSB3-202ENST00000563668 LAMC2Q13753 1193 aa19.47■□□□□ 0.71
SPSB3-202ENST00000563668 BRDTQ58F21 947 aaPredicted RBP19.47■□□□□ 0.71
SPSB3-202ENST00000563668 L1TD1Q5T7N2 865 aaKnown RBP19.47■□□□□ 0.71
SPSB3-202ENST00000563668 TMEM260Q9NX78 707 aa19.47■□□□□ 0.71
SPSB3-202ENST00000563668 SMCO2A6NFE2 343 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms