RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 ARMC5Q96C12 935 aa6.48□□□□□ -1.37
NAE1-211ENST00000563253 SYT3Q9BQG1 590 aa6.48□□□□□ -1.37
NAE1-211ENST00000563253 HIRIP3Q9BW71 556 aaPredicted RBP6.48□□□□□ -1.37
NAE1-211ENST00000563253 SPATA9Q9BWV2 254 aa6.48□□□□□ -1.37
NAE1-211ENST00000563253 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
NAE1-211ENST00000563253 SPATA6Q9NWH7 488 aaPredicted RBP6.48□□□□□ -1.37
NAE1-211ENST00000563253 RTEL1Q9NZ71 1219 aa6.48□□□□□ -1.37
NAE1-211ENST00000563253 PPARGC1AQ9UBK2 798 aaKnown RBP6.48□□□□□ -1.37
NAE1-211ENST00000563253 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 TADA3O75528 432 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 IFRD2Q12894 506 aaPredicted RBP6.47□□□□□ -1.37
NAE1-211ENST00000563253 SMAD4Q13485 552 aaKnown RBP6.47□□□□□ -1.37
NAE1-211ENST00000563253 MTERF2Q49AM1 385 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 KCNT2Q6UVM3 1135 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 ZDHHC14Q8IZN3 488 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 CARFQ8N187 725 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 ARRDC4Q8NCT1 418 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 ZFYVE21Q9BQ24 234 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 SPATA25Q9BR10 227 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 YIPF4Q9BSR8 244 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 C11orf84Q9BUA3 381 aaPredicted RBP6.47□□□□□ -1.37
NAE1-211ENST00000563253 NTMQ9P121 344 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 SIRPGQ9P1W8 387 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 PCDHB4Q9Y5E5 795 aa6.47□□□□□ -1.37
NAE1-211ENST00000563253 TCRBV5S2A0A599 114 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 BLACEA4D250 179 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 SMARCA5O60264 1052 aaPredicted RBP6.46□□□□□ -1.38
NAE1-211ENST00000563253 ADCY3O60266 1144 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 STAT5AP42229 794 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 NFIXQ14938 502 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 STYK1Q6J9G0 422 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 LBX2Q6XYB7 198 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 TTLL7Q6ZT98 887 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 KYQ8NBH2 561 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 JAM3Q9BX67 310 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 NGRNQ9NPE2 291 aaKnown RBP6.46□□□□□ -1.38
NAE1-211ENST00000563253 MYOTQ9UBF9 498 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 PFDN2Q9UHV9 154 aa6.46□□□□□ -1.38
NAE1-211ENST00000563253 KRIT1O00522 736 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 MAFKO60675 156 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 THBS2P35442 1172 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 ITGA1P56199 1179 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 SSRP1Q08945 709 aaKnown RBP6.45□□□□□ -1.38
NAE1-211ENST00000563253 SERINC3Q13530 473 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 KIZQ2M2Z5 673 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 CYP4F22Q6NT55 531 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 FRMD5Q7Z6J6 570 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 PHOSPHO1Q8TCT1 267 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 RELTQ969Z4 430 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 SMOC1Q9H4F8 434 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 DTLQ9NZJ0 730 aa6.45□□□□□ -1.38
NAE1-211ENST00000563253 GRK2P25098 689 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 GRK3P35626 688 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 SARSP49591 514 aaKnown RBP6.44□□□□□ -1.38
NAE1-211ENST00000563253 GPR85P60893 370 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 NKX3-2P78367 333 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 RBL2Q08999 1139 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 NT5DC1Q5TFE4 455 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 STK32CQ86UX6 486 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 IFNL3Q8IZI9 196 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 TTLL6Q8N841 843 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.44□□□□□ -1.38
NAE1-211ENST00000563253 PIP4K2CQ8TBX8 421 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 TOE1Q96GM8 510 aaKnown RBP6.44□□□□□ -1.38
NAE1-211ENST00000563253 TEPSINQ96N21 525 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 ADAM7Q9H2U9 754 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 SLC6A20Q9NP91 592 aa6.44□□□□□ -1.38
NAE1-211ENST00000563253 ASXL2Q76L83 1435 aa6.43□□□□□ -1.38
NAE1-211ENST00000563253 B8ZZF3 427 aa6.43□□□□□ -1.38
NAE1-211ENST00000563253 DIAPH1O60610 1272 aaKnown RBP6.43□□□□□ -1.38
NAE1-211ENST00000563253 RPL13P26373 211 aaKnown RBP6.43□□□□□ -1.38
NAE1-211ENST00000563253 RASA3Q14644 834 aa6.43□□□□□ -1.38
NAE1-211ENST00000563253 SCUBE1Q8IWY4 988 aa6.43□□□□□ -1.38
NAE1-211ENST00000563253 ZBTB38Q8NAP3 1195 aaPredicted RBP6.43□□□□□ -1.38
NAE1-211ENST00000563253 CDC6Q99741 560 aa6.43□□□□□ -1.38
NAE1-211ENST00000563253 USP40Q9NVE5 1235 aa6.43□□□□□ -1.38
NAE1-211ENST00000563253 ASH2LQ9UBL3 628 aa6.43□□□□□ -1.38
NAE1-211ENST00000563253 NOBOXO60393 691 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 FOXD2O60548 495 aaPredicted RBP6.42□□□□□ -1.38
NAE1-211ENST00000563253 SOD2P04179 222 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 TEPPQ6URK8 271 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 OTOP3Q7RTS5 596 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 ZNF761Q86XN6 746 aaPredicted RBP6.42□□□□□ -1.38
NAE1-211ENST00000563253 CXorf38Q8TB03 319 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 TRAF6Q9Y4K3 522 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 NCANO14594 1321 aa6.42□□□□□ -1.38
NAE1-211ENST00000563253 TRBV23-1A0A0A0MS06 115 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 PRRG2O14669 202 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 SLC27A2O14975 620 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 LRG1P02750 347 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 GNAT1P11488 350 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 SYN1P17600 705 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 GJA9P57773 515 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 SUMO1P63165 101 aaKnown RBP6.41□□□□□ -1.38
NAE1-211ENST00000563253 SPIRE1Q08AE8 756 aa6.41□□□□□ -1.38
NAE1-211ENST00000563253 ADAM9Q13443 819 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms