RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
NAE1-211ENST00000563253 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
NAE1-211ENST00000563253 PHF23Q9BUL5 403 aaPredicted RBP21.81■■□□□ 1.08
NAE1-211ENST00000563253 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
NAE1-211ENST00000563253 FOXD1Q16676 465 aa20.27■□□□□ 0.84
NAE1-211ENST00000563253 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
NAE1-211ENST00000563253 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
NAE1-211ENST00000563253 ADRA2BP18089 450 aa19.28■□□□□ 0.68
NAE1-211ENST00000563253 PIAS4Q8N2W9 510 aaPredicted RBP19.06■□□□□ 0.64
NAE1-211ENST00000563253 MSH5O43196 834 aa18.79■□□□□ 0.6
NAE1-211ENST00000563253 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
NAE1-211ENST00000563253 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
NAE1-211ENST00000563253 MAPK8IP2Q13387 824 aaPredicted RBP17.55■□□□□ 0.4
NAE1-211ENST00000563253 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
NAE1-211ENST00000563253 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
NAE1-211ENST00000563253 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
NAE1-211ENST00000563253 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
NAE1-211ENST00000563253 KCNA4P22459 653 aa16.98■□□□□ 0.31
NAE1-211ENST00000563253 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
NAE1-211ENST00000563253 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
NAE1-211ENST00000563253 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
NAE1-211ENST00000563253 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
NAE1-211ENST00000563253 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
NAE1-211ENST00000563253 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
NAE1-211ENST00000563253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
NAE1-211ENST00000563253 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
NAE1-211ENST00000563253 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
NAE1-211ENST00000563253 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
NAE1-211ENST00000563253 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
NAE1-211ENST00000563253 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
NAE1-211ENST00000563253 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
NAE1-211ENST00000563253 ZBTB22O15209 634 aa15.62■□□□□ 0.09
NAE1-211ENST00000563253 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
NAE1-211ENST00000563253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
NAE1-211ENST00000563253 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
NAE1-211ENST00000563253 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
NAE1-211ENST00000563253 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
NAE1-211ENST00000563253 APLP2Q06481 763 aa15.46■□□□□ 0.07
NAE1-211ENST00000563253 CAPN15O75808 1086 aa15.41■□□□□ 0.06
NAE1-211ENST00000563253 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
NAE1-211ENST00000563253 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
NAE1-211ENST00000563253 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
NAE1-211ENST00000563253 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
NAE1-211ENST00000563253 DSG3P32926 999 aa15.22■□□□□ 0.03
NAE1-211ENST00000563253 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
NAE1-211ENST00000563253 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
NAE1-211ENST00000563253 ABCB7O75027 752 aa15.1■□□□□ 0.01
NAE1-211ENST00000563253 POLA2Q14181 598 aa14.98□□□□□ -0.01
NAE1-211ENST00000563253 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
NAE1-211ENST00000563253 FBLN2P98095 1184 aa14.57□□□□□ -0.08
NAE1-211ENST00000563253 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
NAE1-211ENST00000563253 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
NAE1-211ENST00000563253 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
NAE1-211ENST00000563253 SPDYE2BA6NHP3 402 aa14.31□□□□□ -0.12
NAE1-211ENST00000563253 SPDYE6P0CI01 402 aa14.31□□□□□ -0.12
NAE1-211ENST00000563253 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
NAE1-211ENST00000563253 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
NAE1-211ENST00000563253 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
NAE1-211ENST00000563253 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
NAE1-211ENST00000563253 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
NAE1-211ENST00000563253 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
NAE1-211ENST00000563253 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
NAE1-211ENST00000563253 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
NAE1-211ENST00000563253 CHRDL2Q6WN34 429 aa13.99□□□□□ -0.17
NAE1-211ENST00000563253 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
NAE1-211ENST00000563253 FKBP8Q14318 412 aa13.88□□□□□ -0.19
NAE1-211ENST00000563253 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
NAE1-211ENST00000563253 PROM2Q8N271 834 aa13.83□□□□□ -0.2
NAE1-211ENST00000563253 POTEHQ6S545 545 aa13.82□□□□□ -0.2
NAE1-211ENST00000563253 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
NAE1-211ENST00000563253 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
NAE1-211ENST00000563253 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
NAE1-211ENST00000563253 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
NAE1-211ENST00000563253 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
NAE1-211ENST00000563253 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
NAE1-211ENST00000563253 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
NAE1-211ENST00000563253 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
NAE1-211ENST00000563253 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
NAE1-211ENST00000563253 HAX1O00165 279 aa13.38□□□□□ -0.27
NAE1-211ENST00000563253 MIER1Q8N108 512 aa13.37□□□□□ -0.27
NAE1-211ENST00000563253 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
NAE1-211ENST00000563253 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
NAE1-211ENST00000563253 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
NAE1-211ENST00000563253 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
NAE1-211ENST00000563253 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
NAE1-211ENST00000563253 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
NAE1-211ENST00000563253 EVX2Q03828 476 aa13.25□□□□□ -0.29
NAE1-211ENST00000563253 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
NAE1-211ENST00000563253 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
NAE1-211ENST00000563253 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
NAE1-211ENST00000563253 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
NAE1-211ENST00000563253 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
NAE1-211ENST00000563253 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
NAE1-211ENST00000563253 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
NAE1-211ENST00000563253 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
NAE1-211ENST00000563253 NUBP1P53384 320 aa13.06□□□□□ -0.32
NAE1-211ENST00000563253 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
NAE1-211ENST00000563253 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
NAE1-211ENST00000563253 GABBR2O75899 941 aa12.98□□□□□ -0.33
NAE1-211ENST00000563253 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms