RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 TRAF5O00463 557 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 NKRFO15226 690 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00557-201ENST00000563184 PAPLNO95428 1278 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 AMY2AP04746 511 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 AMY2BP19961 511 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 FLT3P36888 993 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 FAM47CQ5HY64 1035 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 UBE2R2Q712K3 238 aaPredicted RBP7.97□□□□□ -1.13
LINC00557-201ENST00000563184 AHI1Q8N157 1196 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 CISD2Q8N5K1 135 aaKnown RBP7.97□□□□□ -1.13
LINC00557-201ENST00000563184 NETO2Q8NC67 525 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 PIP4K2CQ8TBX8 421 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 INTS4Q96HW7 963 aaKnown RBP7.97□□□□□ -1.13
LINC00557-201ENST00000563184 KRTAP4-12Q9BQ66 201 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 RXFP1Q9HBX9 757 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 PCDH12Q9NPG4 1184 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 SIT1Q9Y3P8 196 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 A0A1W2PQJ5 194 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 DGKIO75912 1065 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 APPP05067 770 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 GNAT1P11488 350 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 PDE6AP16499 860 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 JUNBP17275 347 aaPredicted RBP7.96□□□□□ -1.14
LINC00557-201ENST00000563184 ITGB5P18084 799 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 SOX5P35711 763 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 ARL4AP40617 200 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 SLC6A11P48066 632 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 LACTBP83111 547 aaPredicted RBP7.96□□□□□ -1.14
LINC00557-201ENST00000563184 SKOR2Q2VWA4 1001 aaPredicted RBP7.96□□□□□ -1.14
LINC00557-201ENST00000563184 EMC4Q5J8M3 183 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 STRA8Q7Z7C7 330 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 CABP7Q86V35 215 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 ANKLE2Q86XL3 938 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 SH3RF2Q8TEC5 729 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 LEO1Q8WVC0 666 aaPredicted RBP7.96□□□□□ -1.14
LINC00557-201ENST00000563184 WNK4Q96J92 1243 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 BRINP2Q9C0B6 783 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 SMURF1Q9HCE7 757 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 SLC6A20Q9NP91 592 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 CATSPERZQ9NTU4 200 aa7.96□□□□□ -1.14
LINC00557-201ENST00000563184 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.95□□□□□ -1.14
LINC00557-201ENST00000563184 SGSM2O43147 1006 aa7.95□□□□□ -1.14
LINC00557-201ENST00000563184 CYBBP04839 570 aa7.95□□□□□ -1.14
LINC00557-201ENST00000563184 JAM2P57087 298 aa7.95□□□□□ -1.14
LINC00557-201ENST00000563184 ST5P78524 1137 aa7.95□□□□□ -1.14
LINC00557-201ENST00000563184 OSTM1Q86WC4 334 aa7.95□□□□□ -1.14
LINC00557-201ENST00000563184 AFAP1L2Q8N4X5 818 aa7.95□□□□□ -1.14
LINC00557-201ENST00000563184 RNF114Q9Y508 228 aa7.95□□□□□ -1.14
LINC00557-201ENST00000563184 ZC3H12DA2A288 527 aaKnown RBP7.94□□□□□ -1.14
LINC00557-201ENST00000563184 GSTA4O15217 222 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 TADA3O75528 432 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 GLI1P08151 1106 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 SPIRE1Q08AE8 756 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 GPR19Q15760 415 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 ADGRF1Q5T601 910 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 FSTL4Q6MZW2 842 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 PAQR3Q6TCH7 311 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 ZSWIM9Q86XI8 627 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 CHST14Q8NCH0 376 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 UHMK1Q8TAS1 419 aaKnown RBP7.94□□□□□ -1.14
LINC00557-201ENST00000563184 SLC6A17Q9H1V8 727 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 KLHL14Q9P2G3 628 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
LINC00557-201ENST00000563184 ZNF891A8MT65 544 aaPredicted RBP7.93□□□□□ -1.14
LINC00557-201ENST00000563184 NUDT19A8MXV4 375 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 YBX3P16989 372 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC00557-201ENST00000563184 CNGA1P29973 690 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 DSG1Q02413 1049 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 CRY1Q16526 586 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 STEAP3Q658P3 488 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 RPTNQ6XPR3 784 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 ARHGAP36Q6ZRI8 547 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 KIF18BQ86Y91 864 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 DCP2Q8IU60 420 aaKnown RBP7.93□□□□□ -1.14
LINC00557-201ENST00000563184 ZCRB1Q8TBF4 217 aaKnown RBP7.93□□□□□ -1.14
LINC00557-201ENST00000563184 GOLGA2P5Q9HBQ8 144 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 B4GALT6Q9UBX8 382 aa7.93□□□□□ -1.14
LINC00557-201ENST00000563184 ZNF503-AS2A6NEH8 195 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 F8W031 263 aaPredicted RBP7.92□□□□□ -1.14
LINC00557-201ENST00000563184 MAN2B1O00754 1011 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 KCNK3O14649 394 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 HGSO14964 777 aaPredicted RBP7.92□□□□□ -1.14
LINC00557-201ENST00000563184 EYA4O95677 639 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 F2P00734 622 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 KRT15P19012 456 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 KCNMB1Q16558 191 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 CREB3L3Q68CJ9 461 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 HHIPL2Q6UWX4 724 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 DDX46Q7L014 1031 aaKnown RBP7.92□□□□□ -1.14
LINC00557-201ENST00000563184 OTOP1Q7RTM1 612 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 PTRH1Q86Y79 214 aaKnown RBP7.92□□□□□ -1.14
LINC00557-201ENST00000563184 NXPE1Q8N323 547 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 PANK1Q8TE04 598 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 SEC14L1Q92503 715 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 CD244Q9BZW8 370 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 ZNF652Q9Y2D9 606 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 TELO2Q9Y4R8 837 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 CARMIL2Q6F5E8 1435 aa7.92□□□□□ -1.14
LINC00557-201ENST00000563184 BIN1O00499 593 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms