RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 HAS3O00219 553 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 ARHGEF15O94989 841 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 CCND2P30279 289 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 MCM5P33992 734 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 PTPN11Q06124 597 aaPredicted RBP12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 LAMC2Q13753 1193 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 MFSD10Q14728 455 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 DGKDQ16760 1214 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 SESTD1Q86VW0 696 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 COL25A1Q9BXS0 654 aaPredicted RBP12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 GTF2IRD1Q9UHL9 959 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 SLC4A7Q9Y6M7 1214 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
KLHDC4-209ENST00000562872 TET1Q8NFU7 2136 aa12.77□□□□□ -0.36
KLHDC4-209ENST00000562872 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 MEIS2O14770 477 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 KIAA0753Q2KHM9 967 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 TRIM71Q2Q1W2 868 aaKnown RBP12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 TRAF7Q6Q0C0 670 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 NFXL1Q6ZNB6 911 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 SPRED2Q7Z698 418 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 TMCO2Q7Z6W1 182 aaPredicted RBP12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 CCDC82Q8N4S0 544 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 SPATA33Q96N06 139 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 MAP3K14Q99558 947 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 PRDM6Q9NQX0 595 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 RTEL1Q9NZ71 1219 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 NOD1Q9Y239 953 aa12.77□□□□□ -0.37
KLHDC4-209ENST00000562872 NBNO60934 754 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 PFKMP08237 780 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 ATP2A2P16615 1042 aaKnown RBP12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 LIFRP42702 1097 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 MBTPS1Q14703 1052 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 RAB30Q15771 203 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 UBE2SQ16763 222 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 ADCK5Q3MIX3 580 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 MICU3Q86XE3 530 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 TRIM50Q86XT4 487 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 SAMD3Q8N6K7 520 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 TMEM87BQ96K49 555 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 INPP4AQ96PE3 977 aaPredicted RBP12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 C16orf70Q9BSU1 422 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 DOCK5Q9H7D0 1870 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 PTPRSQ13332 1948 aa12.76□□□□□ -0.37
KLHDC4-209ENST00000562872 CCDC69A6NI79 296 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 REV3LO60673 3130 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 CKBP12277 381 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 KIF5BP33176 963 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 BFSP2Q13515 415 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 TMTC3Q6ZXV5 915 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 LRRC8DQ7L1W4 858 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 C7orf31Q8N865 590 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 OSBPL7Q9BZF2 842 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 BRPF3Q9ULD4 1205 aa12.75□□□□□ -0.37
KLHDC4-209ENST00000562872 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 EPOPA6NHQ4 379 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 SPATA31C2B4DYI2 1134 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 RFXAPO00287 272 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 PIK3CDO00329 1044 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 LGALS2P05162 132 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 CA3P07451 260 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 CPA1P15085 419 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 SELPP16109 830 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 ICAM3P32942 547 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 RFC2P35250 354 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 RBL2Q08999 1139 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 ZNF618Q5T7W0 954 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 APOA5Q6Q788 366 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 CYFIP1Q7L576 1253 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 SGMS1Q86VZ5 419 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 AFAP1L1Q8TED9 768 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 CERS4Q9HA82 394 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 MLXIPQ9HAP2 919 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 SLC28A3Q9HAS3 691 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 SEC63Q9UGP8 760 aaKnown RBP12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 PCDHA11Q9Y5I1 949 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 SLC12A7Q9Y666 1083 aa12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 TRIP12Q14669 1992 aaPredicted RBP12.74□□□□□ -0.37
KLHDC4-209ENST00000562872 ATP9AO75110 1047 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
KLHDC4-209ENST00000562872 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms