RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 KRT14P02533 472 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 ATP1A2P50993 1020 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 UBE4AQ14139 1066 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 CEP85LQ5SZL2 805 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 RRAGAQ7L523 313 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 TAF4BQ92750 862 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 CRNKL1Q9BZJ0 848 aaKnown RBP10.9□□□□□ -0.66
TCF4-211ENST00000561992 SEMA6BQ9H3T3 888 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 CNOT10Q9H9A5 744 aaKnown RBP10.9□□□□□ -0.66
TCF4-211ENST00000561992 BARHL2Q9NY43 387 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 LAMB1P07942 1786 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 LAMB2P55268 1798 aa10.9□□□□□ -0.66
TCF4-211ENST00000561992 CICQ96RK0 1608 aaPredicted RBP10.9□□□□□ -0.67
TCF4-211ENST00000561992 CASZ1Q86V15 1759 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CCDC188H7C350 402 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 MYO1FO00160 1098 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CLGNO14967 610 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 TRAPPC3O43617 180 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 PLEKP08567 350 aaPredicted RBP10.89□□□□□ -0.67
TCF4-211ENST00000561992 MRPL12P52815 198 aaKnown RBP10.89□□□□□ -0.67
TCF4-211ENST00000561992 GUCY1A3Q02108 690 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 SNCBQ16143 134 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
TCF4-211ENST00000561992 SFMBT2Q5VUG0 894 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 HGSNATQ68CP4 663 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 SV2BQ7L1I2 683 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 ADGRA1Q86SQ6 560 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 SH2D3CQ8N5H7 860 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 USP38Q8NB14 1042 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 ACTRT1Q8TDG2 376 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CASKIN2Q8WXE0 1202 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CENPTQ96BT3 561 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 MTMR8Q96EF0 704 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 TMEM60Q9H2L4 133 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CACNA1SQ13698 1873 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 SMARCA1P28370 1054 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 NF2P35240 595 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 PSEN1P49768 467 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
TCF4-211ENST00000561992 KIAA0895Q8NCT3 520 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CABLES1Q8TDN4 633 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 SGSM3Q96HU1 749 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CCDC114Q96M63 670 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 CEP63Q96MT8 703 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 SLC40A1Q9NP59 571 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 PRDM11Q9NQV5 511 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 FAM207AQ9NSI2 230 aaPredicted RBP10.89□□□□□ -0.67
TCF4-211ENST00000561992 SLC12A6Q9UHW9 1150 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 PLAAQ9Y263 795 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 ATP6V0A2Q9Y487 856 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 NUP98P52948 1817 aa10.89□□□□□ -0.67
TCF4-211ENST00000561992 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
TCF4-211ENST00000561992 E7EVH7 732 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 SLC26A4O43511 780 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 ELF1P32519 619 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 HSPA1LP34931 641 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 EIF3BP55884 814 aaKnown RBP10.88□□□□□ -0.67
TCF4-211ENST00000561992 MARSP56192 900 aaKnown RBP10.88□□□□□ -0.67
TCF4-211ENST00000561992 RASSF7Q02833 373 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 SLC18A3Q16572 532 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 KCTD16Q68DU8 428 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 TTC19Q6DKK2 380 aaPredicted RBP10.88□□□□□ -0.67
TCF4-211ENST00000561992 MAATS1Q7Z4T9 603 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 CROCCP2Q86T23 111 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 IFT81Q8WYA0 676 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 PIGBQ92521 554 aa10.88□□□□□ -0.67
TCF4-211ENST00000561992 JPH2Q9BR39 696 aaPredicted RBP10.88□□□□□ -0.67
TCF4-211ENST00000561992 BZW2Q9Y6E2 419 aaKnown RBP10.88□□□□□ -0.67
TCF4-211ENST00000561992 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 USP17L21D6R901 530 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 STXBP3O00186 592 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 NCK2O43639 380 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 DNAJC8O75937 253 aaPredicted RBP10.87□□□□□ -0.67
TCF4-211ENST00000561992 FAM153BP0C7A2 387 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 EZRP15311 586 aaKnown RBP10.87□□□□□ -0.67
TCF4-211ENST00000561992 ERCC3P19447 782 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 GNA11P29992 359 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 CXCR5P32302 372 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 SLC1A4P43007 532 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 HDLBPQ00341 1268 aaKnown RBP10.87□□□□□ -0.67
TCF4-211ENST00000561992 IFT88Q13099 833 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 XRCC4Q13426 336 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 NONOQ15233 471 aaKnown RBP eCLIP10.87□□□□□ -0.67
TCF4-211ENST00000561992 PPP2R5EQ16537 467 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 FAM153CQ494X1 144 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 CAVIN4Q5BKX8 364 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 RCSD1Q6JBY9 416 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 LRRC55Q6ZSA7 311 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 PARP9Q8IXQ6 854 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 SCFD2Q8WU76 684 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 KRT12Q99456 494 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 RAB34Q9BZG1 259 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 ZMYND12Q9H0C1 365 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 SLITRK6Q9H5Y7 841 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 FAM153AQ9UHL3 310 aa10.87□□□□□ -0.67
TCF4-211ENST00000561992 A0A1B0GUL6 1792 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms