RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SEZ6LQ9BYH1 1024 aa29.27■■■□□ 2.28
NME3-202ENST00000561637 DDX41Q9UJV9 622 aaKnown RBP29.27■■■□□ 2.28
NME3-202ENST00000561637 TET1Q8NFU7 2136 aa29.26■■■□□ 2.27
NME3-202ENST00000561637 MMP3P08254 477 aa29.26■■■□□ 2.27
NME3-202ENST00000561637 POU3F3P20264 500 aaPredicted RBP29.26■■■□□ 2.27
NME3-202ENST00000561637 HOXD11P31277 338 aaPredicted RBP29.26■■■□□ 2.27
NME3-202ENST00000561637 CHMP4BP1P59074 171 aa29.26■■■□□ 2.27
NME3-202ENST00000561637 AAK1Q2M2I8 961 aa29.26■■■□□ 2.27
NME3-202ENST00000561637 FAM47CQ5HY64 1035 aa29.26■■■□□ 2.27
NME3-202ENST00000561637 DEFB128Q7Z7B8 93 aa29.26■■■□□ 2.27
NME3-202ENST00000561637 CTCFLQ8NI51 663 aaPredicted RBP29.26■■■□□ 2.27
NME3-202ENST00000561637 PTPRSQ13332 1948 aa29.26■■■□□ 2.27
NME3-202ENST00000561637 hCG_1642624A0A1W2PR95 340 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 GCOM1H8Y6P7 765 aaPredicted RBP29.25■■■□□ 2.27
NME3-202ENST00000561637 CDC45O75419 566 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 EIF3JO75822 258 aaKnown RBP29.25■■■□□ 2.27
NME3-202ENST00000561637 ARHGEF15O94989 841 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 GH1P01241 217 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 POLR2MP0CAP2 368 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 PGM5Q15124 567 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 TMEM87BQ96K49 555 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 LRFN3Q9BTN0 628 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 SPZ1Q9BXG8 430 aa29.25■■■□□ 2.27
NME3-202ENST00000561637 CCDC69A6NI79 296 aa29.24■■■□□ 2.27
NME3-202ENST00000561637 ADCK5Q3MIX3 580 aa29.24■■■□□ 2.27
NME3-202ENST00000561637 CCDC136Q96JN2 1154 aa29.24■■■□□ 2.27
NME3-202ENST00000561637 MRVI1Q9Y6F6 885 aa29.24■■■□□ 2.27
NME3-202ENST00000561637 BRDTQ58F21 947 aaPredicted RBP29.23■■■□□ 2.27
NME3-202ENST00000561637 VSIG10LQ86VR7 867 aa29.23■■■□□ 2.27
NME3-202ENST00000561637 KAT2BQ92831 832 aa29.23■■■□□ 2.27
NME3-202ENST00000561637 MAP3K14Q99558 947 aa29.23■■■□□ 2.27
NME3-202ENST00000561637 MTA3Q9BTC8 594 aa29.23■■■□□ 2.27
NME3-202ENST00000561637 TANC1Q9C0D5 1861 aa29.23■■■□□ 2.27
NME3-202ENST00000561637 TRIP12Q14669 1992 aaPredicted RBP29.22■■■□□ 2.27
NME3-202ENST00000561637 BCAS3Q9H6U6 928 aa29.22■■■□□ 2.27
NME3-202ENST00000561637 GTPBP6O43824 516 aaPredicted RBP29.21■■■□□ 2.27
NME3-202ENST00000561637 TLL1O43897 1013 aa29.21■■■□□ 2.27
NME3-202ENST00000561637 PFKMP08237 780 aa29.21■■■□□ 2.27
NME3-202ENST00000561637 KIF5BP33176 963 aa29.21■■■□□ 2.27
NME3-202ENST00000561637 LIFRP42702 1097 aa29.21■■■□□ 2.27
NME3-202ENST00000561637 SP2Q02086 613 aa29.21■■■□□ 2.27
NME3-202ENST00000561637 USP17L6PQ6QN14 398 aa29.21■■■□□ 2.27
NME3-202ENST00000561637 CCDC82Q8N4S0 544 aa29.21■■■□□ 2.27
NME3-202ENST00000561637 RRP36Q96EU6 259 aaKnown RBP29.21■■■□□ 2.27
NME3-202ENST00000561637 MYH7BA7E2Y1 1941 aa29.2■■■□□ 2.27
NME3-202ENST00000561637 MICU3Q86XE3 530 aa29.2■■■□□ 2.26
NME3-202ENST00000561637 MAP3K20Q9NYL2 800 aaKnown RBP29.2■■■□□ 2.26
NME3-202ENST00000561637 COL4A4P53420 1690 aaPredicted RBP29.2■■■□□ 2.26
NME3-202ENST00000561637 KPNA6O60684 536 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 ZNF286BP0CG31 522 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 MRPS9P82933 396 aaKnown RBP29.19■■■□□ 2.26
NME3-202ENST00000561637 EXOSC10Q01780 885 aaKnown RBP29.19■■■□□ 2.26
NME3-202ENST00000561637 TAP1Q03518 808 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 SPRED2Q7Z698 418 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 ARNTL2Q8WYA1 636 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 KHSRPQ92945 711 aaKnown RBP eCLIP29.19■■■□□ 2.26
NME3-202ENST00000561637 NEK1Q96PY6 1258 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 CTAGE1Q96RT6 745 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 SLC12A7Q9Y666 1083 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 FRMPD4Q14CM0 1322 aa29.19■■■□□ 2.26
NME3-202ENST00000561637 SUPT20HL2P0C7V6 817 aa29.18■■■□□ 2.26
NME3-202ENST00000561637 CPA1P15085 419 aa29.18■■■□□ 2.26
NME3-202ENST00000561637 UBA1P22314 1058 aaKnown RBP29.18■■■□□ 2.26
NME3-202ENST00000561637 CCND2P30279 289 aa29.18■■■□□ 2.26
NME3-202ENST00000561637 NFRKBQ6P4R8 1299 aa29.18■■■□□ 2.26
NME3-202ENST00000561637 TMTC3Q6ZXV5 915 aa29.18■■■□□ 2.26
NME3-202ENST00000561637 TMTC2Q8N394 836 aa29.18■■■□□ 2.26
NME3-202ENST00000561637 BRPF3Q9ULD4 1205 aa29.18■■■□□ 2.26
NME3-202ENST00000561637 GGPS1O95749 300 aa29.17■■■□□ 2.26
NME3-202ENST00000561637 TRAF1Q13077 416 aa29.17■■■□□ 2.26
NME3-202ENST00000561637 SEMA3FQ13275 785 aa29.17■■■□□ 2.26
NME3-202ENST00000561637 GDF6Q6KF10 455 aaPredicted RBP29.17■■■□□ 2.26
NME3-202ENST00000561637 SGMS1Q86VZ5 419 aa29.17■■■□□ 2.26
NME3-202ENST00000561637 DHX37Q8IY37 1157 aaKnown RBP29.17■■■□□ 2.26
NME3-202ENST00000561637 SAMD3Q8N6K7 520 aa29.17■■■□□ 2.26
NME3-202ENST00000561637 EMID1Q96A84 441 aaPredicted RBP29.17■■■□□ 2.26
NME3-202ENST00000561637 COG5Q9UP83 839 aa29.17■■■□□ 2.26
NME3-202ENST00000561637 TELO2Q9Y4R8 837 aa29.17■■■□□ 2.26
NME3-202ENST00000561637 BRWD1Q9NSI6 2320 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 MEIS2O14770 477 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 RNF20Q5VTR2 975 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 MYSM1Q5VVJ2 828 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 FANCBQ8NB91 859 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 SLC9A7Q96T83 725 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 LZTS2Q9BRK4 669 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 RTEL1Q9NZ71 1219 aa29.16■■■□□ 2.26
NME3-202ENST00000561637 SEC63Q9UGP8 760 aaKnown RBP29.16■■■□□ 2.26
NME3-202ENST00000561637 ACTN1P12814 892 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 SMARCA1P28370 1054 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 GNAQP50148 359 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 LAMC2Q13753 1193 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 HSDL1Q3SXM5 330 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 CELF3Q5SZQ8 465 aaKnown RBP29.15■■■□□ 2.26
NME3-202ENST00000561637 APOA5Q6Q788 366 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 PPTC7Q8NI37 304 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 ALG1Q9BT22 464 aa29.15■■■□□ 2.26
NME3-202ENST00000561637 IQCF3P0C7M6 154 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 CALM1P0DP23 149 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 CALM2P0DP24 149 aa29.14■■■□□ 2.26
NME3-202ENST00000561637 CALM3P0DP25 149 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms