RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 MBTPS1Q14703 1052 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 IMMTQ16891 758 aaKnown RBP9.78□□□□□ -0.84
PALB2-202ENST00000561514 TCTN1Q2MV58 587 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 KCNV1Q6PIU1 500 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 CWC27Q6UX04 472 aaKnown RBP9.78□□□□□ -0.84
PALB2-202ENST00000561514 SEPT14Q6ZU15 432 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 VSIG10LQ86VR7 867 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 STAG2Q8N3U4 1231 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 PPP1R13LQ8WUF5 828 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 AMNQ9BXJ7 453 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 DIAPH3Q9NSV4 1193 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 CTNNA3Q9UI47 895 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 MAD2L2Q9UI95 211 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 RFXAPO00287 272 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 PPFIA4O75335 1185 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 TGFB3P10600 412 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 COL9A1P20849 921 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 ERVK-21P61565 698 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 DEFB103AP81534 67 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 MFSD10Q14728 455 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 CELF3Q5SZQ8 465 aaKnown RBP9.77□□□□□ -0.85
PALB2-202ENST00000561514 ARHGEF16Q5VV41 709 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 SPRED2Q7Z698 418 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 SERINC5Q86VE9 423 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 WNT8BQ93098 351 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 FTOQ9C0B1 505 aaKnown RBP eCLIP9.77□□□□□ -0.85
PALB2-202ENST00000561514 RIOX1Q9H6W3 641 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 HDAC6Q9UBN7 1215 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 MRVI1Q9Y6F6 885 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 TET1Q8NFU7 2136 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 COL4A6Q14031 1691 aa9.77□□□□□ -0.85
PALB2-202ENST00000561514 REV3LO60673 3130 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 LCHNA4D1U4 455 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 KLRF2D3W0D1 207 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 TLL1O43897 1013 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 CAND2O75155 1236 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 CFBP00751 764 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 UBA1P22314 1058 aaKnown RBP9.76□□□□□ -0.85
PALB2-202ENST00000561514 KCNJ6P48051 423 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 KCNQ1P51787 676 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 HIC1Q14526 733 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 GRM4Q14833 912 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 PGM5Q15124 567 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 KIAA0753Q2KHM9 967 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 IFIT1BQ5T764 474 aaKnown RBP9.76□□□□□ -0.85
PALB2-202ENST00000561514 KRT40Q6A162 431 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 C7orf31Q8N865 590 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 IL31RAQ8NI17 732 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 SP7Q8TDD2 431 aaPredicted RBP9.76□□□□□ -0.85
PALB2-202ENST00000561514 ARNTL2Q8WYA1 636 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 NECAB3Q96P71 396 aaPredicted RBP9.76□□□□□ -0.85
PALB2-202ENST00000561514 INPP4AQ96PE3 977 aaPredicted RBP9.76□□□□□ -0.85
PALB2-202ENST00000561514 RAD9AQ99638 391 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 UBAC1Q9BSL1 405 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 C16orf70Q9BSU1 422 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 EMSYQ7Z589 1322 aa9.76□□□□□ -0.85
PALB2-202ENST00000561514 GBF1Q92538 1859 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 LINC01553A4QN01 128 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 CYTH3O43739 400 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 LGR5O75473 907 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 ZNF286BP0CG31 522 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 ICAM3P32942 547 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 HTRA4P83105 476 aaPredicted RBP9.75□□□□□ -0.85
PALB2-202ENST00000561514 FGD1P98174 961 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 SP2Q02086 613 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 TROAPQ12815 778 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 TRAF1Q13077 416 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 HSDL1Q3SXM5 330 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 ZNF618Q5T7W0 954 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 CYB5R4Q7L1T6 521 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 DHX37Q8IY37 1157 aaKnown RBP9.75□□□□□ -0.85
PALB2-202ENST00000561514 MICALL1Q8N3F8 863 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 HLA-CQ95604 372 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 C1QTNF1Q9BXJ1 281 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 CERS4Q9HA82 394 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 ARIH1Q9Y4X5 557 aaPredicted RBP9.75□□□□□ -0.85
PALB2-202ENST00000561514 PCDHA1Q9Y5I3 950 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 SCN5AQ14524 2016 aa9.75□□□□□ -0.85
PALB2-202ENST00000561514 STAM2O75886 525 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 GGPS1O95749 300 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 GSPT1P15170 499 aaKnown RBP9.74□□□□□ -0.85
PALB2-202ENST00000561514 CCND2P30279 289 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 VASPP50552 380 aaPredicted RBP9.74□□□□□ -0.85
PALB2-202ENST00000561514 ADAM17P78536 824 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 ZNF200P98182 395 aaPredicted RBP9.74□□□□□ -0.85
PALB2-202ENST00000561514 COL19A1Q14993 1142 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 PLEKHG4Q58EX7 1191 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 SPATA33Q96N06 139 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 TGS1Q96RS0 853 aaKnown RBP9.74□□□□□ -0.85
PALB2-202ENST00000561514 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 SUGCTQ9HAC7 445 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 MUC6Q6W4X9 2439 aa9.74□□□□□ -0.85
PALB2-202ENST00000561514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.73□□□□□ -0.85
PALB2-202ENST00000561514 PNMA6FA0A0J9YX94 578 aa9.73□□□□□ -0.85
PALB2-202ENST00000561514 SPATA31C2B4DYI2 1134 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms