RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 MYSM1Q5VVJ2 828 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 TRIM50Q86XT4 487 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 DEFB123Q8N688 67 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 SAMD3Q8N6K7 520 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 PPTC7Q8NI37 304 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 FAM161BQ96MY7 647 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 USP26Q9BXU7 913 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 NCOA5Q9HCD5 579 aaKnown RBP14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 TMEM260Q9NX78 707 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 CXXC1Q9P0U4 656 aaPredicted RBP14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 NAP1L2Q9ULW6 460 aaPredicted RBP14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 GRXCR1A8MXD5 290 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 HAS3O00219 553 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 ITGB5P18084 799 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 ZNF200P98182 395 aaPredicted RBP14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 RASIP1Q5U651 963 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 PCNX4Q63HM2 1172 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 ZNF365Q70YC5 407 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 DHX37Q8IY37 1157 aaKnown RBP14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 GUCD1Q96NT3 240 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 UPF3BQ9BZI7 483 aaKnown RBP14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 TTYH1Q9H313 450 aaPredicted RBP14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 MTMR10Q9NXD2 777 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 V9GY48 417 aaPredicted RBP14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 PTPRSQ13332 1948 aa14.58□□□□□ -0.08
CHRNA3-208ENST00000561128 SPATA31C2B4DYI2 1134 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 ATP9AO75110 1047 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 REC8O95072 547 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 ICAM3P32942 547 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 PSEN2P49810 448 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 PKN1Q16512 942 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 TCTN1Q2MV58 587 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 NFRKBQ6P4R8 1299 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 PHKBQ93100 1093 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 SPATA33Q96N06 139 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 C16orf70Q9BSU1 422 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 ALG1Q9BT22 464 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 PSTPIP2Q9H939 334 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 RBM28Q9NW13 759 aaKnown RBP14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 HDAC6Q9UBN7 1215 aa14.57□□□□□ -0.08
CHRNA3-208ENST00000561128 PBX2P40425 430 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 METAP2P50579 478 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 NAPAP54920 295 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 SP4Q02446 784 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 TRAF1Q13077 416 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 PPIGQ13427 754 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 MFSD10Q14728 455 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 GPNMBQ14956 572 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 NTRK3Q16288 839 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 DGKDQ16760 1214 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 SYNE3Q6ZMZ3 975 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 IL23AQ9NPF7 189 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 PKD2L1Q9P0L9 805 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 PCDHA6Q9UN73 950 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 PCDHA8Q9Y5H6 950 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 UBIAD1Q9Y5Z9 338 aa14.56□□□□□ -0.08
CHRNA3-208ENST00000561128 LAMA2P24043 3122 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 FIBPO43427 364 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 KPNA6O60684 536 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 LGALS2P05162 132 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 HMGB1P09429 215 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 KCNA2P16389 499 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 CLK2P49760 499 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 CCT2P78371 535 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 LAMC2Q13753 1193 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 KIAA0753Q2KHM9 967 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 TRIM71Q2Q1W2 868 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 TRAF7Q6Q0C0 670 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 CYFIP1Q7L576 1253 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 SESTD1Q86VW0 696 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 CUL5Q93034 780 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 GPR20Q99678 358 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 OSBPL7Q9BZF2 842 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 BARHL2Q9NY43 387 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 GTF2IRD1Q9UHL9 959 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 SIP14410 1827 aa14.55□□□□□ -0.08
CHRNA3-208ENST00000561128 TRIP12Q14669 1992 aaPredicted RBP14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 SEC24BO95487 1268 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 PDIA3P30101 505 aaKnown RBP14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 RCAN1P53805 252 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 PTGISQ16647 500 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 BRDTQ58F21 947 aaPredicted RBP14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 GPR153Q6NV75 609 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 RUFY3Q7L099 469 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 OTOP2Q7RTS6 562 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 DEFB128Q7Z7B8 93 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 FBXL16Q8N461 479 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 TMEM199Q8N511 208 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 ANO3Q9BYT9 981 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 TET1Q8NFU7 2136 aa14.54□□□□□ -0.08
CHRNA3-208ENST00000561128 SCG2P13521 617 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 ADCY7P51828 1080 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 EVCP57679 992 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 SMAD3P84022 425 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms