RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 CCDC103Q8IW40 242 aa6.77□□□□□ -1.33
PSMA4-221ENST00000560842 TTC9BQ8N6N2 239 aa6.77□□□□□ -1.33
PSMA4-221ENST00000560842 KCTD13Q8WZ19 329 aa6.77□□□□□ -1.33
PSMA4-221ENST00000560842 SAMD11Q96NU1 681 aa6.77□□□□□ -1.33
PSMA4-221ENST00000560842 IER2Q9BTL4 223 aa6.77□□□□□ -1.33
PSMA4-221ENST00000560842 TMEFF2Q9UIK5 374 aaPredicted RBP6.77□□□□□ -1.33
PSMA4-221ENST00000560842 FAM153BP0C7A2 387 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 NCAM1P13591 858 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 ECI1P42126 302 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 RANGAP1P46060 587 aaPredicted RBP6.76□□□□□ -1.33
PSMA4-221ENST00000560842 GJA9P57773 515 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 KCNAB2Q13303 367 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 INF2Q27J81 1249 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 PRSS53Q2L4Q9 553 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 YOD1Q5VVQ6 348 aaPredicted RBP6.76□□□□□ -1.33
PSMA4-221ENST00000560842 CPNE8Q86YQ8 564 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 JAMLQ86YT9 394 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 SCUBE1Q8IWY4 988 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 MTA3Q9BTC8 594 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 PDLIM7Q9NR12 457 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 PFDN2Q9UHV9 154 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 KDM2BQ8NHM5 1336 aa6.76□□□□□ -1.33
PSMA4-221ENST00000560842 PRODHO43272 600 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 ZNF20P17024 532 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 PRR5P85299 388 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 NTRK3Q16288 839 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 FOXB2Q5VYV0 432 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 RSPO2Q6UXX9 243 aaPredicted RBP6.75□□□□□ -1.33
PSMA4-221ENST00000560842 NSMFQ6X4W1 530 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 Q8N1Y9 231 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 LILRB2Q8N423 598 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 DPF3Q92784 378 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 KISS1RQ969F8 398 aaPredicted RBP6.75□□□□□ -1.33
PSMA4-221ENST00000560842 ZSWIM4Q9H7M6 989 aa6.75□□□□□ -1.33
PSMA4-221ENST00000560842 MEFVO15553 781 aaPredicted RBP6.74□□□□□ -1.33
PSMA4-221ENST00000560842 NPHS1O60500 1241 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 LTBRP36941 435 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 KCNJ6P48051 423 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 HMGA2P52926 109 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
PSMA4-221ENST00000560842 C2orf27AQ580R0 203 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 BICRALQ6AI39 1079 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 PPIL6Q8IXY8 311 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 THAP3Q8WTV1 239 aaPredicted RBP6.74□□□□□ -1.33
PSMA4-221ENST00000560842 DIO2Q92813 273 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 PIF1Q9H611 641 aa6.74□□□□□ -1.33
PSMA4-221ENST00000560842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.74□□□□□ -1.33
PSMA4-221ENST00000560842 A0A1W2PQJ5 194 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 F8W031 263 aaPredicted RBP6.73□□□□□ -1.33
PSMA4-221ENST00000560842 ASGR2P07307 311 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 GLI4P10075 376 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 MC3RP41968 323 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 B3GNT8Q7Z7M8 397 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 RCBTB1Q8NDN9 531 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 PLEKHO2Q8TD55 490 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 MRFAP1L1Q96HT8 127 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 EXOC2Q96KP1 924 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 C8orf49Q96NF6 230 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 GPR27Q9NS67 375 aa6.73□□□□□ -1.33
PSMA4-221ENST00000560842 CCDC163A0A0D9SF12 145 aa6.72□□□□□ -1.33
PSMA4-221ENST00000560842 SARSP49591 514 aaKnown RBP6.72□□□□□ -1.33
PSMA4-221ENST00000560842 STYK1Q6J9G0 422 aa6.72□□□□□ -1.33
PSMA4-221ENST00000560842 ZNF761Q86XN6 746 aaPredicted RBP6.72□□□□□ -1.33
PSMA4-221ENST00000560842 DCAF4Q8WV16 495 aa6.72□□□□□ -1.33
PSMA4-221ENST00000560842 LOXL4Q96JB6 756 aa6.72□□□□□ -1.33
PSMA4-221ENST00000560842 ZFYVE21Q9BQ24 234 aa6.72□□□□□ -1.33
PSMA4-221ENST00000560842 DHRS4Q9BTZ2 278 aa6.72□□□□□ -1.33
PSMA4-221ENST00000560842 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
PSMA4-221ENST00000560842 FBLN5Q9UBX5 448 aa6.72□□□□□ -1.33
PSMA4-221ENST00000560842 TIMM13Q9Y5L4 95 aaPredicted RBP6.72□□□□□ -1.33
PSMA4-221ENST00000560842 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 PLATP00750 562 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 C6orf222P0C671 652 aaPredicted RBP6.71□□□□□ -1.34
PSMA4-221ENST00000560842 GTF2A2P52657 109 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 SUMO1P63165 101 aaKnown RBP6.71□□□□□ -1.34
PSMA4-221ENST00000560842 FAM209AQ5JX71 171 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 LZTR1Q8N653 840 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 CDIP1Q9H305 208 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 USP35Q9P2H5 1018 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 GULP1Q9UBP9 304 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 X6R8D5 127 aa6.71□□□□□ -1.34
PSMA4-221ENST00000560842 C6P13671 934 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 LCP1P13796 627 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 GDF5P43026 501 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 TBC1D10BQ4KMP7 808 aaPredicted RBP6.7□□□□□ -1.34
PSMA4-221ENST00000560842 RIOX2Q8IUF8 465 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 NETO2Q8NC67 525 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 ZSWIM2Q8NEG5 633 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 MENTQ9BUN1 341 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 SPATA6Q9NWH7 488 aaPredicted RBP6.7□□□□□ -1.34
PSMA4-221ENST00000560842 NTMQ9P121 344 aa6.7□□□□□ -1.34
PSMA4-221ENST00000560842 DBR1Q9UK59 544 aaKnown RBP6.7□□□□□ -1.34
PSMA4-221ENST00000560842 MRPS23Q9Y3D9 190 aaKnown RBP6.7□□□□□ -1.34
PSMA4-221ENST00000560842 RPL11P62913 178 aaKnown RBP6.69□□□□□ -1.34
PSMA4-221ENST00000560842 LSAMPQ13449 338 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 SQSTM1Q13501 440 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 NLRP10Q86W26 655 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 ALG3Q92685 438 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 DVL3Q92997 716 aaPredicted RBP6.69□□□□□ -1.34
PSMA4-221ENST00000560842 CDC6Q99741 560 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms