RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ZNF652Q9Y2D9 606 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 NRKQ7Z2Y5 1582 aa7.54□□□□□ -1.2
TSPAN3-209ENST00000560715 TLL1O43897 1013 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 NEBLO76041 1014 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ZSCAN22P10073 491 aaPredicted RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 PYGMP11217 842 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ELF1P32519 619 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 PLEKHO1Q53GL0 409 aaPredicted RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TTC19Q6DKK2 380 aaPredicted RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 KCNV1Q6PIU1 500 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 VHLLQ6RSH7 139 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 LRRC31Q6UY01 552 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 DTHD1Q6ZMT9 781 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ARL10Q8N8L6 244 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 SH3KBP1Q96B97 665 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 NDOR1Q9UHB4 597 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ATP6V1DQ9Y5K8 247 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 SERTM1A2A2V5 107 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 CCDC69A6NI79 296 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TISP43B9A030 160 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 B9A039 149 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ANKRD65E5RJM6 399 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 NAT2P11245 290 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ATICP31939 592 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TSPAN7P41732 249 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 NEDD9Q14511 834 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ARID5BQ14865 1188 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 IQSEC1Q6DN90 963 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 MZT2AQ6P582 158 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 SARM1Q6SZW1 724 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 HEATR4Q86WZ0 1026 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TEX11Q8IYF3 940 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 MSL3Q8N5Y2 521 aaKnown RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ZNF784Q8NCA9 323 aaPredicted RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 CCDC47Q96A33 483 aaKnown RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 CDK5RAP3Q96JB5 506 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TTC1Q99614 292 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 GGA3Q9NZ52 723 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 VPS18Q9P253 973 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 PTCH1Q13635 1447 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 PTPRUQ92729 1446 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 BLACEA4D250 179 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 MAP2K7O14733 419 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TPP1O14773 563 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ERC2O15083 957 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 FBXO21O94952 628 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 SNUPNO95149 360 aaKnown RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 SMTNP53814 917 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TLR1Q15399 786 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ANO6Q4KMQ2 910 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 BRAPQ7Z569 592 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 GPR161Q8N6U8 529 aaKnown RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ANKRD24Q8TF21 1146 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 TBC1D31Q96DN5 1066 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 ARHGEF4Q9NR80 690 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 DNM3Q9UQ16 869 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 AXIN2Q9Y2T1 843 aa7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 CDK12Q9NYV4 1490 aaPredicted RBP7.53□□□□□ -1.2
TSPAN3-209ENST00000560715 IL16Q14005 1332 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 PSDA5PKW4 1024 aaPredicted RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 ACTN4O43707 911 aaKnown RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 AP1G1O43747 822 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 OPA1O60313 960 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 GCFC2P16383 781 aaKnown RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 UBA7P41226 1012 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 TMPOP42166 694 aaKnown RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 ALDH5A1P51649 535 aaPredicted RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 REC114Q7Z4M0 266 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 SLC7A14Q8TBB6 771 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 ZBED2Q9BTP6 218 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 VEZTQ9HBM0 779 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 ETAA1Q9NY74 926 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 RGS12O14924 1447 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 PHLPP2Q6ZVD8 1323 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 FAM155AB1AL88 458 aaPredicted RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 SRGAP3O43295 1099 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 IPO7O95373 1038 aaKnown RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 PAX7P23759 505 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 GPTP24298 496 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 TXLNAP40222 546 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 HSPA2P54652 639 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 ERVK-9P63128 1117 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 EXOSC9Q06265 439 aaKnown RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 ADCY2Q08462 1091 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 MPRIPQ6WCQ1 1025 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 BPHLQ86WA6 291 aaPredicted RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 CPA6Q8N4T0 437 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 KISS1RQ969F8 398 aaPredicted RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 PPP1R13BQ96KQ4 1090 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 NUP62CLQ9H1M0 184 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 ABCB6Q9NP58 842 aa7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 XRN1Q8IZH2 1706 aaKnown RBP7.52□□□□□ -1.21
TSPAN3-209ENST00000560715 PRR36Q9H6K5 1346 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms