RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 POLR2MP0CAP2 368 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 MYOGP15173 224 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 PTK7Q13308 1070 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 MFSD10Q14728 455 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 VSIG10LQ86VR7 867 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 HOMER1Q86YM7 354 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 HERC6Q8IVU3 1022 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 PPP1R13LQ8WUF5 828 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 PPM1EQ8WY54 764 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 MTA3Q9BTC8 594 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 HDAC6Q9UBN7 1215 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 MICAL3Q7RTP6 2002 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 PNMA6FA0A0J9YX94 578 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 E7EWF7 191 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 SGSM2O43147 1006 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 GTPBP6O43824 516 aaPredicted RBP15.68■□□□□ 0.1
SMAD3-214ENST00000560402 PPFIA4O75335 1185 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 CDC45O75419 566 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 RGS20O76081 388 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 GGPS1O95749 300 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 CXCL10P02778 98 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 ZNF286BP0CG31 522 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
SMAD3-214ENST00000560402 POU3F3P20264 500 aaPredicted RBP15.68■□□□□ 0.1
SMAD3-214ENST00000560402 MRPS5P82675 430 aaKnown RBP15.68■□□□□ 0.1
SMAD3-214ENST00000560402 TROAPQ12815 778 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 KIAA0753Q2KHM9 967 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 GNPTABQ3T906 1256 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 CELF3Q5SZQ8 465 aaKnown RBP15.68■□□□□ 0.1
SMAD3-214ENST00000560402 MYSM1Q5VVJ2 828 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
SMAD3-214ENST00000560402 SPATA33Q96N06 139 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 ASB2Q96Q27 587 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 PIGSQ96S52 555 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 MAP3K14Q99558 947 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 PRDM6Q9NQX0 595 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 SIP14410 1827 aa15.68■□□□□ 0.1
SMAD3-214ENST00000560402 TNFRSF10AO00220 468 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 CKBP12277 381 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 UBA1P22314 1058 aaKnown RBP15.67■□□□□ 0.1
SMAD3-214ENST00000560402 HOXA13P31271 388 aaPredicted RBP15.67■□□□□ 0.1
SMAD3-214ENST00000560402 WDR5P61964 334 aaKnown RBP15.67■□□□□ 0.1
SMAD3-214ENST00000560402 PTH1RQ03431 593 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 BECN1Q14457 450 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 SLC35G1Q2M3R5 365 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 IL27Q8NEV9 243 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 EMSYQ7Z589 1322 aa15.67■□□□□ 0.1
SMAD3-214ENST00000560402 MUC3AQ02505 3323 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 DOCK5Q9H7D0 1870 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 ABHD14A-ACY1A0A1B0GW23 586 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 CYTH3O43739 400 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 TLL1O43897 1013 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 DDAH1O94760 285 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 KIF5BP33176 963 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 TAP1Q03518 808 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 AAK1Q2M2I8 961 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 HSDL1Q3SXM5 330 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 MB21D2Q8IYB1 491 aaPredicted RBP15.66■□□□□ 0.1
SMAD3-214ENST00000560402 IL31RAQ8NI17 732 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 SPZ1Q9BXG8 430 aa15.66■□□□□ 0.1
SMAD3-214ENST00000560402 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
SMAD3-214ENST00000560402 NCOR1O75376 2440 aa15.65■□□□□ 0.1
SMAD3-214ENST00000560402 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
SMAD3-214ENST00000560402 ICAM3P32942 547 aa15.65■□□□□ 0.1
SMAD3-214ENST00000560402 CCDC85BQ15834 202 aaPredicted RBP15.65■□□□□ 0.1
SMAD3-214ENST00000560402 TRIM71Q2Q1W2 868 aaKnown RBP15.65■□□□□ 0.1
SMAD3-214ENST00000560402 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
SMAD3-214ENST00000560402 MAP4K1Q92918 833 aa15.65■□□□□ 0.1
SMAD3-214ENST00000560402 INPP4AQ96PE3 977 aaPredicted RBP15.65■□□□□ 0.1
SMAD3-214ENST00000560402 MLXIPQ9HAP2 919 aa15.65■□□□□ 0.1
SMAD3-214ENST00000560402 REV3LO60673 3130 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 FIBPO43427 364 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 NBNO60934 754 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 CAND2O75155 1236 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 ANTXR2P58335 489 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 NEDD9Q14511 834 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 GPNMBQ14956 572 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 XRRA1Q6P2D8 792 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 FCHSD1Q86WN1 690 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 MICALL1Q8N3F8 863 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 ADAMTS19Q8TE59 1207 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 CUL5Q93034 780 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 LZTS2Q9BRK4 669 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 C16orf70Q9BSU1 422 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 SEC63Q9UGP8 760 aaKnown RBP15.64■□□□□ 0.09
SMAD3-214ENST00000560402 RBM8AQ9Y5S9 174 aaKnown RBP15.64■□□□□ 0.09
SMAD3-214ENST00000560402 MTCH2Q9Y6C9 303 aa15.64■□□□□ 0.09
SMAD3-214ENST00000560402 COL4A6Q14031 1691 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 KAT6AQ92794 2004 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 C17orf102A2RUQ5 167 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 NOP56O00567 594 aaKnown RBP15.63■□□□□ 0.09
SMAD3-214ENST00000560402 GJB5O95377 273 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 HOXC8P31273 242 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 GNAQP50148 359 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 SP2Q02086 613 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 IKBKEQ14164 716 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 ZNF618Q5T7W0 954 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms