RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 HSDL1Q3SXM5 330 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 LRIT3Q3SXY7 679 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 FAM47CQ5HY64 1035 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 CELF3Q5SZQ8 465 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 PCNX4Q63HM2 1172 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 TM6SF1Q9BZW5 370 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 NID2Q14112 1375 aa13.39□□□□□ -0.27
RABGGTA-216ENST00000560243 SPATA31C2B4DYI2 1134 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 SEC24BO95487 1268 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 ZNF286BP0CG31 522 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 TGFB3P10600 412 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 CSF2RAP15509 400 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 ICAM3P32942 547 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 EVCP57679 992 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 NTRK3Q16288 839 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 PKN1Q16512 942 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 MFSD5Q6N075 450 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 C16orf59Q7L2K0 433 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 PPTC7Q8NI37 304 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 PHKBQ93100 1093 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 SPATA33Q96N06 139 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 NOC4LQ9BVI4 516 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 HIPK3Q9H422 1215 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 RIC8AQ9NPQ8 531 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 BARHL2Q9NY43 387 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 PCDHA6Q9UN73 950 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 PCDHA8Q9Y5H6 950 aa13.38□□□□□ -0.27
RABGGTA-216ENST00000560243 CCDC196A0A1B0GTZ2 297 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 HOXD8P13378 290 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 ITGB5P18084 799 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 ADCY7P51828 1080 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 DGKDQ16760 1214 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 PFKFB3Q16875 520 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 GNPTABQ3T906 1256 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 PPP1R18Q6NYC8 613 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 KCNV1Q6PIU1 500 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 WNT8AQ9H1J5 351 aa13.37□□□□□ -0.27
RABGGTA-216ENST00000560243 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 SMCO2A6NFE2 343 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 SPDYE3A6NKU9 549 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 FIBPO43427 364 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 ATP9AO75110 1047 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 STAM2O75886 525 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 F2P00734 622 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 ACRP10323 421 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 SCG2P13521 617 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 CCL23P55773 120 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 XRRA1Q6P2D8 792 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.275e-9■■■□□ 16.1
RABGGTA-216ENST00000560243 ALG1Q9BT22 464 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 SEZ6LQ9BYH1 1024 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 MLXIPQ9HAP2 919 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
RABGGTA-216ENST00000560243 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 HAS3O00219 553 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 PRPF3O43395 683 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 DTNBO60941 627 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 PPFIA4O75335 1185 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 PSEN2P49810 448 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 SP4Q02446 784 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 STK3Q13188 491 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 MFSD10Q14728 455 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 Q7L0L9 218 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 VWCEQ96DN2 955 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 SCLYQ96I15 445 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 C16orf70Q9BSU1 422 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 SLC26A6Q9BXS9 759 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 PKD2L1Q9P0L9 805 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 HDAC6Q9UBN7 1215 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 UBIAD1Q9Y5Z9 338 aa13.35□□□□□ -0.27
RABGGTA-216ENST00000560243 hCG_1984214I3L0E3 225 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 KCNA2P16389 499 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 IFNAR1P17181 557 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 PPIGQ13427 754 aaKnown RBP eCLIP13.34□□□□□ -0.278e-11■■□□□ 14.2
RABGGTA-216ENST00000560243 HIC1Q14526 733 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 KIAA0753Q2KHM9 967 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 METTL7BQ6UX53 244 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 TRIM50Q86XT4 487 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 ZNF713Q8N859 430 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 GPRASP2Q96D09 838 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 ZNF274Q96GC6 653 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 RNPC3Q96LT9 517 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 GPR20Q99678 358 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 ANO3Q9BYT9 981 aa13.34□□□□□ -0.27
RABGGTA-216ENST00000560243 LGALS2P05162 132 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms