RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 TMX3Q96JJ7 454 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 HHIPL1Q96JK4 782 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 TMEM87BQ96K49 555 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 IDI2Q9BXS1 227 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 JAG2Q9Y219 1238 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 TAF6LQ9Y6J9 622 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 FLT1P17948 1338 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 COL4A5P29400 1685 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 ATRNL1Q5VV63 1379 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 ENTPD3O75355 529 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 PRPF40AO75400 957 aaKnown RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 WDHD1O75717 1129 aaPredicted RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 PDGFAP04085 211 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 DDIT3P35638 169 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 LIFRP42702 1097 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 USP5P45974 858 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 AK2P54819 239 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 ZNF280AP59817 542 aaPredicted RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 ATP2B2Q01814 1243 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 KIF23Q02241 960 aaPredicted RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 CXCL9Q07325 125 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 PDE4BQ07343 736 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 SART3Q15020 963 aaKnown RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 CCDC178Q5BJE1 867 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 C20orf204Q6ZNR8 217 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 TTC6Q86TZ1 520 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 TREML1Q86YW5 311 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 GJD3Q8N144 294 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 TMTC2Q8N394 836 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 SDR42E1Q8WUS8 393 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 ESR2Q92731 530 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 ALKBH8Q96BT7 664 aaKnown RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 ZNF274Q96GC6 653 aaPredicted RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 EHD4Q9H223 541 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 DHX36Q9H2U1 1008 aaKnown RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 ADARB2Q9NS39 739 aaKnown RBP7.26□□□□□ -1.25
CLPX-206ENST00000560166 RNF186Q9NXI6 227 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 SAGE1Q9NXZ1 904 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.26□□□□□ -1.25
CLPX-206ENST00000560166 MYH13Q9UKX3 1938 aa7.26□□□□□ -1.25
CLPX-206ENST00000560166 LAMA4Q16363 1823 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 NID2Q14112 1375 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 PNMA6FA0A0J9YX94 578 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 PSMD14O00487 310 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 PRC1O43663 620 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 HAND2P61296 217 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 FGD1P98174 961 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 TOB2Q14106 344 aaPredicted RBP7.25□□□□□ -1.25
CLPX-206ENST00000560166 PPP2R5BQ15173 497 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 C1orf53Q5VUE5 145 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 RGMBQ6NW40 437 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 CDC42EP5Q6NZY7 148 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 SGMS1Q86VZ5 419 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 KIAA0825Q8IV33 1275 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 SLC17A8Q8NDX2 589 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 GPR152Q8TDT2 470 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 ZBED3Q96IU2 234 aaPredicted RBP7.25□□□□□ -1.25
CLPX-206ENST00000560166 LLPHQ9BRT6 129 aaKnown RBP7.25□□□□□ -1.25
CLPX-206ENST00000560166 KRTAP4-2Q9BYR5 136 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 KCNQ5Q9NR82 932 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 MCM9Q9NXL9 1143 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 ZDHHC3Q9NYG2 299 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 TMOD2Q9NZR1 351 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 ANGEL1Q9UNK9 670 aaKnown RBP7.25□□□□□ -1.25
CLPX-206ENST00000560166 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.25□□□□□ -1.25
CLPX-206ENST00000560166 NEDD4P46934 1319 aa7.25□□□□□ -1.25
CLPX-206ENST00000560166 ZNF646O15015 1829 aaPredicted RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 PSME4Q14997 1843 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 PLIN4Q96Q06 1357 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 DHX16O60231 1041 aaKnown RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 PFKFB2O60825 505 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 HSP90AA1P07900 732 aaKnown RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 ZNF157P51786 506 aaPredicted RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 ANTXR2P58335 489 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 GABPAQ06546 454 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 PSMD2Q13200 908 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 DLGAP5Q15398 846 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 PKN2Q16513 984 aaKnown RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 CFAP100Q494V2 611 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 METTL16Q86W50 562 aaKnown RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 IQCA1Q86XH1 822 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 TGFBRAP1Q8WUH2 860 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 ANKS1AQ92625 1134 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 OSBPL5Q9H0X9 879 aaPredicted RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 TCP11L1Q9NUJ3 509 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 USP40Q9NVE5 1235 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 GPRC5DQ9NZD1 345 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 SWAP70Q9UH65 585 aa7.24□□□□□ -1.25
CLPX-206ENST00000560166 DDX60LQ5H9U9 1706 aaKnown RBP7.24□□□□□ -1.25
CLPX-206ENST00000560166 A0A0A0MRY4 1105 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 ERICH2A1L162 156 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 MINDY4BA8MYZ0 360 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 B4E1Z4 1266 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 F8W031 263 aaPredicted RBP7.23□□□□□ -1.25
CLPX-206ENST00000560166 SH2B2O14492 632 aaPredicted RBP7.23□□□□□ -1.25
CLPX-206ENST00000560166 MYO1BO43795 1136 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 RAD17O75943 681 aa7.23□□□□□ -1.25
CLPX-206ENST00000560166 POLR3DP05423 398 aaPredicted RBP7.23□□□□□ -1.25
CLPX-206ENST00000560166 HLA-DOAP06340 250 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms