RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 HSDL1Q3SXM5 330 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 ZNF618Q5T7W0 954 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 VSIG10LQ86VR7 867 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 IQCA1Q86XH1 822 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 PPTC7Q8NI37 304 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
HERC1-204ENST00000559715 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 SUGCTQ9HAC7 445 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 SENP2Q9HC62 589 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 VAT1LQ9HCJ6 419 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 CD320Q9NPF0 282 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 MRPL11Q9Y3B7 192 aaKnown RBP12.94□□□□□ -0.34
HERC1-204ENST00000559715 TAF6LQ9Y6J9 622 aa12.94□□□□□ -0.34
HERC1-204ENST00000559715 CYTH3O43739 400 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 PPFIA4O75335 1185 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
HERC1-204ENST00000559715 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 MFAP1P55081 439 aaKnown RBP12.93□□□□□ -0.34
HERC1-204ENST00000559715 CHMP4BP1P59074 171 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 ERVK-21P61565 698 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 MFSD10Q14728 455 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 CCDC178Q5BJE1 867 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 CNKSR3Q6P9H4 555 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 MCF2L2Q86YR7 1114 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 EPHX3Q9H6B9 360 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 C11orf16Q9NQ32 467 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
HERC1-204ENST00000559715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.92□□□□□ -0.34
HERC1-204ENST00000559715 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 LINC01553A4QN01 128 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 KLRF2D3W0D1 207 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 CFBP00751 764 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 PTK7Q13308 1070 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 LAMC2Q13753 1193 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 PGM5Q15124 567 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 CELF3Q5SZQ8 465 aaKnown RBP12.92□□□□□ -0.34
HERC1-204ENST00000559715 ARHGEF16Q5VV41 709 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
HERC1-204ENST00000559715 SERINC5Q86VE9 423 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 GDPD5Q8WTR4 605 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
HERC1-204ENST00000559715 RAD9AQ99638 391 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 AMNQ9BXJ7 453 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 RIOX1Q9H6W3 641 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 LMCD1Q9NZU5 365 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
HERC1-204ENST00000559715 COG5Q9UP83 839 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
HERC1-204ENST00000559715 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 ZBTB5O15062 677 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 PARNO95453 639 aaKnown RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 UBA1P22314 1058 aaKnown RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 PDE4AP27815 886 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 MRPS9P82933 396 aaKnown RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 HTRA4P83105 476 aaPredicted RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 SEMA3FQ13275 785 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 AAMPQ13685 434 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 AAK1Q2M2I8 961 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 C7orf31Q8N865 590 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 HLA-CQ95604 372 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 MAP3K20Q9NYL2 800 aaKnown RBP12.91□□□□□ -0.34
HERC1-204ENST00000559715 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
HERC1-204ENST00000559715 FRMPD4Q14CM0 1322 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 GSPT1P15170 499 aaKnown RBP12.9□□□□□ -0.34
HERC1-204ENST00000559715 KCNJ6P48051 423 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 ADAM17P78536 824 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 TROAPQ12815 778 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.34
HERC1-204ENST00000559715 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
HERC1-204ENST00000559715 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 DBF4BQ8NFT6 615 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
HERC1-204ENST00000559715 KRT23Q9C075 422 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
HERC1-204ENST00000559715 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
HERC1-204ENST00000559715 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 SORBS3O60504 671 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 LGR5O75473 907 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 GGPS1O95749 300 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 CYP21A2P08686 494 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 TGFB3P10600 412 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 PTH1RQ03431 593 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 COL9A3Q14050 684 aaPredicted RBP12.89□□□□□ -0.35
HERC1-204ENST00000559715 GRM4Q14833 912 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
HERC1-204ENST00000559715 PLEKHG4Q58EX7 1191 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 IFIT1BQ5T764 474 aaKnown RBP12.89□□□□□ -0.35
HERC1-204ENST00000559715 SAMD3Q8N6K7 520 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 PIGSQ96S52 555 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 C17orf80Q9BSJ5 609 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms