RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CTTNQ14247 550 aaKnown RBP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 WDR44Q5JSH3 913 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 MICALCLQ6ZW33 695 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 HDXQ7Z353 690 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 BAG1Q99933 345 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 MYO6Q9UM54 1294 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 INO80B-WBP1J3KQ70 363 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 EBAG9O00559 213 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 HOXD10P28358 340 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 PAFAH1B1P43034 410 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 LIG4P49917 911 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 INO80BQ9C086 356 aaPredicted RBP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 AKT3Q9Y243 479 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 NEBLO76041 1014 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 ZNF569Q5MCW4 686 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 IDI2Q9BXS1 227 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 IMPACTQ9P2X3 320 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 LUC7L2Q9Y383 392 aaKnown RBP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 SRPRBQ9Y5M8 271 aaKnown RBP11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 LRP6O75581 1613 aa11.75□□□□□ -0.53
CARMIL3-202ENST00000559694 PSAPP07602 524 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 TNNI1P19237 187 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 DMP1Q13316 513 aaPredicted RBP11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 AGBL1Q96MI9 1066 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 PARK7Q99497 189 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 POTEMA6NI47 508 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 TMCO5BA8MYB1 307 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 KRT19P08727 400 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 BACE1P56817 501 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 GRAMD1CQ8IYS0 662 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 BHMT2Q9H2M3 363 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 JMJD4Q9H9V9 463 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 ZDHHC9Q9Y397 364 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 GOLGA6L7A0A1B0GV03 622 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 ERLIN2O94905 339 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 TDP2O95551 362 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 FANCCQ00597 558 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 GJA10Q969M2 543 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 EHD4Q9H223 541 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 ZFYVE28Q9HCC9 887 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 TAB2Q9NYJ8 693 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 RPN1P04843 607 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 CYP2B6P20813 491 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 FKBP1AP62942 108 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 PIGOQ8TEQ8 1089 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 ADPGKQ9BRR6 497 aa11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 XPO4Q9C0E2 1151 aaKnown RBP11.74□□□□□ -0.53
CARMIL3-202ENST00000559694 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 TAX1BP1Q86VP1 789 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 CCDC42Q96M95 316 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 PPP1R16BQ96T49 567 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 PLCG1P19174 1290 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 CYLC1P35663 651 aaPredicted RBP11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 RHBDL3P58872 404 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 USP50Q70EL3 339 aaPredicted RBP11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 CCDC127Q96BQ5 260 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 SLURP2P0DP57 97 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 SHMT1P34896 483 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 RIC1Q4ADV7 1423 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 FAM49AQ9H0Q0 323 aaPredicted RBP11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 RIC8AQ9NPQ8 531 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 PPP2R3BQ9Y5P8 575 aa11.73□□□□□ -0.53
CARMIL3-202ENST00000559694 ANKRD62A6NC57 917 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 SLFN14P0C7P3 912 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 KRT5P13647 590 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 COPB2P35606 906 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 TTLL4Q14679 1199 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 LRRC41Q15345 812 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 TERF2Q15554 542 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 HACE1Q8IYU2 909 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 GPRC5AQ8NFJ5 357 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 RAET1EQ8TD07 263 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 MRFAP1L1Q96HT8 127 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 GINM1Q9NU53 330 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 ZEB2O60315 1214 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 CEP55Q53EZ4 464 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 TRPM4Q8TD43 1214 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 FAM20AQ96MK3 541 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 TBC1D22BQ9NU19 505 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 HNRNPDLO14979 420 aaKnown RBP11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 PLA2G4BP0C869 781 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 GTF2A2P52657 109 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 NEDD9Q14511 834 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 RSPH3Q86UC2 560 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 OPTNQ96CV9 577 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 CUEDC2Q9H467 287 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 ANKFY1Q9P2R3 1169 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms