RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 CERS4Q9HA82 394 aa15.24■□□□□ 0.03
TPM1-220ENST00000559556 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
TPM1-220ENST00000559556 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
TPM1-220ENST00000559556 MAD2L2Q9UI95 211 aa15.24■□□□□ 0.03
TPM1-220ENST00000559556 ZBTB5O15062 677 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 TLL1O43897 1013 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 RGS20O76081 388 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 BMP1P13497 986 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 MFSD10Q14728 455 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 KIAA0753Q2KHM9 967 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 MYSM1Q5VVJ2 828 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 C7orf31Q8N865 590 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 ARNTL2Q8WYA1 636 aa15.23■□□□□ 0.03
TPM1-220ENST00000559556 FNDC1Q4ZHG4 1894 aaPredicted RBP15.23■□□□□ 0.03
TPM1-220ENST00000559556 WDFY4Q6ZS81 3184 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 PALM3A6NDB9 673 aaPredicted RBP15.22■□□□□ 0.03
TPM1-220ENST00000559556 NBNO60934 754 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 DEFB103AP81534 67 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 PTK7Q13308 1070 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 PGM5Q15124 567 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 TRIM71Q2Q1W2 868 aaKnown RBP15.22■□□□□ 0.03
TPM1-220ENST00000559556 KRT40Q6A162 431 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 KCNV1Q6PIU1 500 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 CYB5R4Q7L1T6 521 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 SPRED2Q7Z698 418 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 DHX37Q8IY37 1157 aaKnown RBP15.22■□□□□ 0.03
TPM1-220ENST00000559556 ALG1Q9BT22 464 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 PCDHA1Q9Y5I3 950 aa15.22■□□□□ 0.03
TPM1-220ENST00000559556 PLXNA4Q9HCM2 1894 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 LCHNA4D1U4 455 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 LPXNO60711 386 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 EFCAB14O75071 495 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 COL9A1P20849 921 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 KCNQ1P51787 676 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 GRB10Q13322 594 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 SLC35G1Q2M3R5 365 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 TCTN1Q2MV58 587 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 HSDL1Q3SXM5 330 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 CELF3Q5SZQ8 465 aaKnown RBP15.21■□□□□ 0.03
TPM1-220ENST00000559556 TRAF7Q6Q0C0 670 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 VSIG10LQ86VR7 867 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 IL31RAQ8NI17 732 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 WNT8BQ93098 351 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 RIOX1Q9H6W3 641 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 COG5Q9UP83 839 aa15.21■□□□□ 0.03
TPM1-220ENST00000559556 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 ABHD14A-ACY1A0A1B0GW23 586 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 PPFIA4O75335 1185 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 GJB5O95377 273 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 GGPS1O95749 300 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 TGFB3P10600 412 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 MYCLP12524 364 aaPredicted RBP15.2■□□□□ 0.02
TPM1-220ENST00000559556 UBA1P22314 1058 aaKnown RBP15.2■□□□□ 0.02
TPM1-220ENST00000559556 HOXA13P31271 388 aaPredicted RBP15.2■□□□□ 0.02
TPM1-220ENST00000559556 HOXC8P31273 242 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 TRAF1Q13077 416 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 MBTPS1Q14703 1052 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 GRM4Q14833 912 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 SKIV2LQ15477 1246 aaKnown RBP15.2■□□□□ 0.02
TPM1-220ENST00000559556 TMCO2Q7Z6W1 182 aaPredicted RBP15.2■□□□□ 0.02
TPM1-220ENST00000559556 NECAB3Q96P71 396 aaPredicted RBP15.2■□□□□ 0.02
TPM1-220ENST00000559556 ZNF318Q5VUA4 2279 aa15.2■□□□□ 0.02
TPM1-220ENST00000559556 EMSYQ7Z589 1322 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 GSPT1P15170 499 aaKnown RBP15.19■□□□□ 0.02
TPM1-220ENST00000559556 CCND2P30279 289 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 TRDNQ13061 729 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 HIC1Q14526 733 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 ZNF618Q5T7W0 954 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 SERINC5Q86VE9 423 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 HOMER1Q86YM7 354 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 GDPD5Q8WTR4 605 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 SPATA33Q96N06 139 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 RAD9AQ99638 391 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 C16orf70Q9BSU1 422 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 ZBED2Q9BTP6 218 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 LMCD1Q9NZU5 365 aa15.19■□□□□ 0.02
TPM1-220ENST00000559556 CYTH3O43739 400 aa15.18■□□□□ 0.02
TPM1-220ENST00000559556 CYP21A2P08686 494 aa15.18■□□□□ 0.02
TPM1-220ENST00000559556 PDE4AP27815 886 aa15.18■□□□□ 0.02
TPM1-220ENST00000559556 ZNF200P98182 395 aaPredicted RBP15.18■□□□□ 0.02
TPM1-220ENST00000559556 SP2Q02086 613 aa15.18■□□□□ 0.02
TPM1-220ENST00000559556 MKRN4PQ13434 485 aaPredicted RBP15.18■□□□□ 0.02
TPM1-220ENST00000559556 IKBKEQ14164 716 aa15.18■□□□□ 0.02
TPM1-220ENST00000559556 TTC22Q5TAA0 569 aa15.18■□□□□ 0.02
TPM1-220ENST00000559556 PIGSQ96S52 555 aa15.18■□□□□ 0.02
TPM1-220ENST00000559556 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 LINC01553A4QN01 128 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 GCOM1H8Y6P7 765 aaPredicted RBP15.17■□□□□ 0.02
TPM1-220ENST00000559556 LGR5O75473 907 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 ERVK-21P61565 698 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 TROAPQ12815 778 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 GPKOWQ92917 476 aaPredicted RBP eCLIP15.17■□□□□ 0.02
TPM1-220ENST00000559556 HLA-CQ95604 372 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
TPM1-220ENST00000559556 SENP2Q9HC62 589 aa15.17■□□□□ 0.02
TPM1-220ENST00000559556 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
TPM1-220ENST00000559556 ERICH2A1L162 156 aa15.16■□□□□ 0.02
TPM1-220ENST00000559556 H3BRB1 525 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms